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PDBsum entry 2d69
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PDB id:
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Lyase
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Title:
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Crystal structure of the complex of sulfate ion and octameric ribulose-1,5-bisphosphate carboxylase/oxygenase (rubisco) from pyrococcus horikoshii ot3 (form-2 crystal)
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Structure:
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Ribulose bisphosphate carboxylase. Chain: a, b, d, e. Synonym: rubisco, ribulose-1,5-bisphosphate carboxylase/oxygenase. Engineered: yes
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Source:
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Pyrococcus horikoshii. Organism_taxid: 70601. Strain: ot3. Expressed in: escherichia coli bl21(de3). Expression_system_taxid: 469008.
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Biol. unit:
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Dimer (from PDB file)
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Resolution:
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1.90Å
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R-factor:
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0.181
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R-free:
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0.209
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Authors:
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E.Mizohata,C.Mishima,R.Akasaka,H.Uda,T.Terada,M.Shirouzu,S.Yokoyama, Riken Structural Genomics/proteomics Initiative (Rsgi)
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Key ref:
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E.Mizohata
et al.
Crystal structure of the complex of sulfate ion and octameric ribulose-1,5-Bisphosphate carboxylase/oxygenase (rubisco) from pyrococcus horikoshii ot3 (form-2 crystal).
To be published,
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Date:
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10-Nov-05
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Release date:
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10-May-06
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PROCHECK
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Headers
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References
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O58677
(RBL_PYRHO) -
Ribulose bisphosphate carboxylase from Pyrococcus horikoshii (strain ATCC 700860 / DSM 12428 / JCM 9974 / NBRC 100139 / OT-3)
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Seq:
Struc:
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430 a.a.
424 a.a.
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Key: |
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PfamA domain |
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Secondary structure |
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CATH domain |
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Enzyme class:
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E.C.4.1.1.39
- ribulose-bisphosphate carboxylase.
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Reaction:
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2 (2R)-3-phosphoglycerate + 2 H+ = D-ribulose 1,5-bisphosphate + CO2 + H2O
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2
×
(2R)-3-phosphoglycerate
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+
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2
×
H(+)
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=
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D-ribulose 1,5-bisphosphate
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+
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CO2
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+
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H2O
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Molecule diagrams generated from .mol files obtained from the
KEGG ftp site
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Links
