PDBsum entry 2d5h Go to PDB code:  Pore analysis for: 2d5h calculated with MOLE 2.0 PDB id 2d5h Pores calculated on whole structure Pores calculated excluding ligands View options MOLEonline 2.0 manipulation and visualization with HETATM: without HETATM:   6 pores, coloured by radius 6 pores, coloured by radius 6 pores, coloured as in list below Pores are connected internal spaces going through the structure. Only pores longer than 25 Å are shown. Pores Free R Length HPathy HPhob Polar Rel Mut Residue..type Ligands Radius 1 1.37 2.11 44.6 -1.75 -0.63 8.6 91 1 2 7 2 0 1 0   2 2.86 4.33 55.6 0.47 0.44 11.2 77 4 1 4 3 5 0 0   3 1.36 1.39 65.8 0.16 0.34 10.4 76 7 1 7 3 7 1 0   4 2.86 4.33 69.8 0.22 0.30 11.2 79 4 2 7 3 6 0 0   5 1.41 1.43 70.0 -0.75 0.15 16.8 82 7 1 6 6 4 1 0   6 2.24 2.30 35.2 0.47 0.21 8.0 77 3 2 5 0 5 0 0   Residue-type_colouring Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C Acknowledgement Pores were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.