PDBsum entry 2d4a Go to PDB code:  Pore analysis for: 2d4a calculated with MOLE 2.0 PDB id 2d4a Pores calculated on whole structure Pores calculated excluding ligands View options MOLEonline 2.0 manipulation and visualization with HETATM: without HETATM:   5 pores, coloured by radius 5 pores, coloured by radius 5 pores, coloured as in list below Pores are connected internal spaces going through the structure. Only pores longer than 25 Å are shown. Pores Free R Length HPathy HPhob Polar Rel Mut Residue..type Ligands Radius 1 2.07 2.50 39.9 -2.40 -0.27 25.9 71 7 3 0 0 4 0 0   2 1.32 1.33 60.9 -1.88 -0.37 18.8 76 8 2 3 1 5 0 0   3 1.16 1.18 188.7 -1.60 -0.51 17.3 84 14 8 10 7 3 2 0   4 1.20 1.20 223.9 -1.59 -0.52 18.4 85 16 10 11 8 3 2 0   5 1.86 3.11 36.6 -1.62 -0.58 14.4 81 5 0 3 2 0 1 0   Residue-type_colouring Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C Acknowledgement Pores were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.