PDBsum entry 2d33 Go to PDB code:  Pore analysis for: 2d33 calculated with MOLE 2.0 PDB id 2d33 Pores calculated on whole structure Pores calculated excluding ligands View options MOLEonline 2.0 manipulation and visualization with HETATM: without HETATM:   13 pores, coloured by radius 14 pores, coloured by radius 14 pores, coloured as in list below Pores are connected internal spaces going through the structure. Only pores longer than 25 Å are shown. Pores Free R Length HPathy HPhob Polar Rel Mut Residue..type Ligands Radius 1 2.09 2.10 29.4 -1.05 -0.39 22.5 77 2 5 1 2 0 1 4   2 2.47 2.52 31.4 -1.84 -0.69 16.1 83 3 2 3 2 0 1 0   3 2.27 2.45 31.6 -0.12 -0.11 11.6 90 2 4 3 5 2 0 0   4 2.04 2.05 40.5 -1.78 -0.52 19.9 80 4 5 2 2 1 2 0   5 1.89 3.40 46.3 -1.51 -0.57 22.1 83 4 4 1 3 1 1 0   6 1.56 1.56 50.6 -1.60 -0.72 14.4 83 2 6 5 2 1 2 1   7 1.80 3.47 52.6 -1.49 -0.40 19.8 85 8 6 3 5 1 1 0  GLU 3519 D CYS 3520 D ADP 3521 D AF3 3522 D MG 3525 D 8 1.81 3.51 53.1 -1.87 -0.31 23.1 84 8 6 4 4 2 2 0  GLU 3519 D CYS 3520 D ADP 3521 D AF3 3522 D MG 3525 D 9 2.06 2.06 82.2 -0.47 -0.07 15.2 83 7 6 4 10 3 2 0  ADP 2521 C 10 1.89 3.31 87.0 -1.41 -0.35 19.5 81 10 6 4 9 2 1 1  GLU 1519 B CYS 1520 B ADP 1521 B AF3 1522 B MG 1525 B 11 2.01 2.05 139.1 -1.07 -0.33 19.2 83 11 13 5 12 3 3 0  ADP 2521 C MG 2525 C 12 1.17 1.18 144.6 -1.19 -0.56 15.9 86 9 8 6 8 1 2 0  ADP 2521 C 13 1.18 1.19 213.7 -1.16 -0.48 14.9 86 8 15 11 7 5 1 0   14 1.44 1.47 223.8 -1.11 -0.47 14.3 84 9 17 13 9 6 3 1   Residue-type_colouring Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C Acknowledgement Pores were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.