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PDBsum entry 2d1r
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Tunnel analysis for: 2d1r calculated with  MOLE 2.0
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PDB id
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2d1r
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Tunnels calculated on whole structure |
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Tunnels calculated excluding ligands
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1 tunnel,
coloured by tunnel radius |
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6 tunnels,
coloured by
tunnel radius
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6 tunnels,
coloured as in
list below
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Tunnels are interior spaces connected with the protein surrounding. Only channels longer than 15 Å are shown. |
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Free R
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Length
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HPathy
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HPhob
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Polar
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Rel Mut
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Residue..type
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Ligands
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Radius |
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1 |
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1.18 |
2.41 |
24.5 |
0.50 |
0.16 |
1.6 |
96 |
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0 |
0 |
4 |
4 |
2 |
0 |
0 |
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2 |
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1.18 |
2.42 |
45.1 |
-0.21 |
-0.08 |
11.5 |
89 |
6 |
2 |
4 |
8 |
2 |
0 |
0 |
AMP 1001 A OLU 2001 A
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3 |
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1.20 |
2.26 |
51.0 |
-0.21 |
-0.05 |
8.8 |
85 |
3 |
3 |
4 |
7 |
5 |
1 |
0 |
AMP 1001 A OLU 2001 A
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4 |
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1.22 |
2.31 |
70.2 |
-0.14 |
-0.01 |
10.8 |
85 |
6 |
3 |
3 |
11 |
3 |
3 |
0 |
AMP 1001 A OLU 2001 A
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5 |
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2.09 |
2.23 |
15.4 |
0.10 |
-0.14 |
11.0 |
79 |
2 |
1 |
0 |
2 |
2 |
0 |
0 |
CSO 63 A CSO 64 A
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6 |
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1.62 |
1.63 |
16.7 |
0.37 |
-0.27 |
6.2 |
80 |
0 |
1 |
2 |
2 |
1 |
0 |
0 |
CSO 63 A
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Residue-type_colouring |
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Positive
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Negative
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Neutral
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Aliphatic
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Aromatic
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Pro & Gly
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Cysteine
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H,K,R
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D,E
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S,T,N,Q
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A,V,L,I,M
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F,Y,W
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P,G
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C
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MOLE 2.0 program