PDBsum entry 2d1h Go to PDB code:  Tunnel analysis for: 2d1h calculated with MOLE 2.0 PDB id 2d1h Tunnels calculated on whole structure Tunnels calculated excluding ligands View options MOLEonline 2.0 manipulation and visualization with HETATM: without HETATM:   2 tunnels, coloured by tunnel radius 4 tunnels, coloured by tunnel radius 4 tunnels, coloured as in list below Tunnels are interior spaces connected with the protein surrounding. Only channels longer than 15 Å are shown. Tunnels Free R Length HPathy HPhob Polar Rel Mut Residue..type Ligands Radius 1 1.21 3.38 16.7 2.38 0.89 3.9 81 2 0 0 7 1 0 0  MSE 30 B 2 1.22 3.54 17.8 2.58 0.84 4.8 82 2 1 0 9 0 0 0  MSE 30 B 3 1.55 1.70 18.6 2.43 0.69 1.9 85 0 1 1 7 1 0 0  MSE 30 B 4 1.20 1.44 20.7 1.69 0.49 11.3 78 1 3 0 9 0 0 0   Residue-type_colouring Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C Acknowledgement Tunnels were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.