PDBsum entry 2cuy Go to PDB code:  Tunnel analysis for: 2cuy calculated with MOLE 2.0 PDB id 2cuy Tunnels calculated on whole structure Tunnels calculated excluding ligands View options MOLEonline 2.0 manipulation and visualization with HETATM: without HETATM:   6 tunnels, coloured by tunnel radius 6 tunnels, coloured by tunnel radius 6 tunnels, coloured as in list below Tunnels are interior spaces connected with the protein surrounding. Only channels longer than 15 Å are shown. Tunnels Free R Length HPathy HPhob Polar Rel Mut Residue..type Ligands Radius 1 1.33 1.40 47.3 -0.89 -0.45 11.9 84 5 3 4 5 0 1 0   2 1.35 1.35 47.8 -0.45 -0.29 10.8 84 4 3 7 8 2 0 0   3 1.35 1.35 50.5 -0.37 -0.25 11.2 82 4 4 7 8 2 0 0   4 1.28 1.33 53.8 -0.90 -0.46 15.4 83 5 5 4 7 0 1 0   5 1.32 1.33 54.4 -1.82 -0.68 23.8 88 5 6 3 4 0 0 0   6 1.30 1.34 61.1 -2.10 -0.69 26.6 87 7 6 3 4 0 0 0   Residue-type_colouring Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C Acknowledgement Tunnels were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.