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PDBsum entry 2ce8

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Top Page protein ligands Protein-protein interface(s) links
Transcription regulation PDB id
2ce8
Contents
Protein chains
337 a.a.
Ligands
MET-PHE-SER-ILE-
ASP-ASN-ILE-LEU-
ALA
×2
Waters ×1077

References listed in PDB file
Key reference
Title Molecular recognition of transcriptional repressor motifs by the wd domain of the groucho/tle corepressor.
Authors B.H.Jennings, L.M.Pickles, S.M.Wainwright, S.M.Roe, L.H.Pearl, D.Ish-Horowicz.
Ref. Mol Cell, 2006, 22, 645-655. [DOI no: 10.1016/j.molcel.2006.04.024]
PubMed id 16762837
Abstract
The Groucho (Gro)/TLE/Grg family of corepressors operates in many signaling pathways (including Notch and Wnt). Gro/TLE proteins recognize a wide range of transcriptional repressors by binding to divergent short peptide sequences, including a C-terminal WRPW/Y motif (Hairy/Hes/Runx) and internal eh1 motifs (FxIxxIL; Engrailed/Goosecoid/Pax/Nkx). Here, we identify several missense mutations in Drosophila Gro, which demonstrate peptide binding to the central pore of the WD (WD40) beta propeller domain in vitro and in vivo. We define these interactions at the molecular level with crystal structures of the WD domain of human TLE1 bound to either WRPW or eh1 peptides. The two distinct peptide motifs adopt markedly different bound conformations but occupy overlapping sites across the central pore of the beta propeller. Our structural and functional analysis explains the rigid conservation of the WRPW motif, the sequence flexibility of eh1 motifs, and other aspects of repressor recognition by Gro in vivo.
Figure 4.
Figure 4. Binding of the WRPW and eh1 Peptide Motifs to the TLE-WD Domain
(A) Backbone of the SMWRPW peptide (purple) from human Hes1 on TLE-WD (ribbons) showing that binding occurs across the pore.
(B) Close-up view of the WPRW core revealing its compact orientation.
(C) Detailed intermolecular interactions between the WRPW core and adjacent amino acids in the WD domain. L743, corresponding to the aminoacid mutated in MB31, is underlined.
(D) The eh1 peptide backbone (purple) from human Gsc on TLE-WD (ribbons) indicating the site of peptide binding and its α-helical structure.
(E) Close-up view of the eh1 core heptapeptide showing its elongated structure.
(F) Detailed intermolecular interactions between the core peptide and adjacent aminoacids in the WD domain showing that contacts are made to the similar amino acids as for WRPW (C).
Figure 5.
Figure 5. Common Conformational Features of Bound WRPW and eh1 Motifs
Superposition of the WRPW and eh1 peptides in their bound conformations, showing the analogous positions adopted by the Trp-1 and Phe-2, respectively. Trp-4 from WRPW overlies the side chains of Ile-3 and Leu-7 from eh1.
The above figures are reprinted by permission from Cell Press: Mol Cell (2006, 22, 645-655) copyright 2006.
Secondary reference #1
Title Crystal structure of the c-Terminal wd40 repeat domain of the human groucho/tle1 transcriptional corepressor.
Authors L.M.Pickles, S.M.Roe, E.J.Hemingway, S.Stifani, L.H.Pearl.
Ref. Structure, 2002, 10, 751-761. [DOI no: 10.1016/S0969-2126(02)00768-2]
PubMed id 12057191
Full text Abstract
Figure 1.
Figure 1. Domain Structure of Groucho/TLE ProteinsSchematic diagram of the defined domains in Gro/TLE corepressors. Glutamine-rich Q domain; glycine/proline-rich GP domain; CcN domain containing nuclear localization and phosphorylation sites; serine/threonine-proline-rich SP domain; and WD40 repeat domain. Residue numbers defining domain boundaries are for human TLE1. Regions of Groucho/TLE proteins implicated in interaction with transcription factors are indicated below (horizontal lines), while those implicated in interactions with repression effectors are indicated above. In many cases, involvement of a particular region of Gro/TLE has only been defined by loss of function on deletion of that region, and not by positive demonstration of interaction.
The above figure is reproduced from the cited reference with permission from Cell Press
PROCHECK
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