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PDBsum entry 2ccl

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Top Page protein ligands metals Protein-protein interface(s) tunnels links
Tunnel analysis for: 2ccl calculated with MOLE 2.0 PDB id
2ccl
Tunnels calculated on whole structure Tunnels calculated excluding ligands

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8 tunnels, coloured by tunnel radius 8 tunnels, coloured by tunnel radius 8 tunnels, coloured as in
list below
Tunnels are interior spaces connected with the protein surrounding. Only channels longer than 15 Å are shown.
Tunnels
Free R
Length
HPathy
HPhob
Polar
Rel Mut
Residue..type
Ligands
Radius
1 1.27 1.37 20.8 -1.54 -0.59 20.6 74 1 2 1 1 2 1 0  
2 1.26 1.86 21.1 -0.55 -0.41 14.7 87 1 2 3 2 1 0 0  
3 1.28 1.37 26.6 -1.89 -0.66 23.6 81 3 4 0 1 1 0 0  
4 1.17 1.76 39.8 -1.02 -0.61 14.4 93 2 4 4 4 1 0 0  
5 1.29 1.29 17.2 -1.00 -0.56 13.7 88 1 2 1 2 1 0 0  
6 1.66 2.75 15.7 -0.54 -0.23 10.2 83 1 2 0 2 1 1 0  
7 1.51 2.02 16.2 -0.35 -0.26 10.2 84 1 1 0 1 1 1 0  
8 1.41 1.61 16.1 -0.93 -0.38 21.1 86 2 2 0 4 0 0 0  

Residue-type_colouring
Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine
H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C

Acknowledgement
Tunnels were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.
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