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PDBsum entry 2cax

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Top Page protein dna_rna Protein-protein interface(s) pores links
Pore analysis for: 2cax calculated with MOLE 2.0 PDB id
2cax
Pores calculated on whole structure Pores calculated excluding ligands

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2 pores, coloured by radius 2 pores, coloured by radius 2 pores, coloured as in
list below
Pores are connected internal spaces going through the structure. Only pores longer than 25 Å are shown.
Pores
Free R
Length
HPathy
HPhob
Polar
Rel Mut
Residue..type
Ligands
Radius
1 1.96 1.96 235.2 -1.72 -0.56 19.4 77 9 9 4 3 4 0 0  DA 8 U DA 9 U DC 12 U DA 13 U DC 14 U DA 15 U DA
16 U DG 17 U DC 18 U DT 23 Y DG 24 Y DT 25 Y DG
26 Y DA 27 Y DC 28 Y DT 29 Y DT 30 Y
2 1.46 1.67 32.1 -0.60 -0.41 14.4 86 4 1 0 3 0 0 0  DT 36 H DC 37 H DG 38 H DG 1 U DA 2 U DA 3 U DT 4
U

Residue-type_colouring
Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine
H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C

Acknowledgement
Pores were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.
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