PDBsum entry 2c8m Go to PDB code:  Tunnel analysis for: 2c8m calculated with MOLE 2.0 PDB id 2c8m Tunnels calculated on whole structure Tunnels calculated excluding ligands View options MOLEonline 2.0 manipulation and visualization with HETATM: without HETATM:   7 tunnels, coloured by tunnel radius 5 tunnels, coloured by tunnel radius 5 tunnels, coloured as in list below Tunnels are interior spaces connected with the protein surrounding. Only channels longer than 15 Å are shown. Tunnels Free R Length HPathy HPhob Polar Rel Mut Residue..type Ligands Radius 1 1.33 1.46 31.0 -1.06 -0.22 19.4 72 6 2 0 4 3 1 0  LPA 900 C 2 1.33 1.44 47.2 -0.86 -0.09 19.3 82 7 3 2 6 4 0 0  LPA 900 C 3 1.33 1.45 61.9 -1.39 -0.23 22.9 80 8 4 1 6 4 1 0  LPA 900 C 4 1.50 2.33 30.9 -1.03 -0.15 20.0 72 6 2 0 4 3 1 0  LPA 900 B 5 1.51 1.51 34.5 -0.46 0.03 17.0 76 5 2 0 6 5 0 0  LPA 900 B Residue-type_colouring Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C Acknowledgement Tunnels were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.