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PDBsum entry 2c8d
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Pore analysis for: 2c8d calculated with  MOLE 2.0
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PDB id
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2c8d
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Pores calculated on whole structure |
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Pores calculated excluding ligands
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7 pores,
coloured by radius |
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7 pores,
coloured by radius
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7 pores,
coloured as in
list below
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Pores are connected internal spaces going through the structure. Only pores longer than 25 Å are shown. |
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Free R
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Length
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HPathy
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HPhob
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Polar
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Rel Mut
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Residue..type
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Ligands
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Radius |
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1 |
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2.35 |
2.35 |
42.8 |
-1.43 |
-0.32 |
16.4 |
80 |
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6 |
1 |
3 |
3 |
2 |
1 |
0 |
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2 |
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2.60 |
2.60 |
50.6 |
-0.94 |
-0.44 |
12.8 |
92 |
3 |
3 |
6 |
9 |
0 |
0 |
0 |
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3 |
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3.27 |
3.34 |
52.1 |
-2.06 |
-0.45 |
23.9 |
85 |
9 |
1 |
5 |
4 |
2 |
0 |
0 |
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4 |
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3.20 |
4.62 |
53.9 |
-1.63 |
-0.31 |
16.6 |
90 |
5 |
1 |
6 |
4 |
1 |
0 |
0 |
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5 |
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2.84 |
3.67 |
61.5 |
-1.14 |
-0.44 |
12.4 |
94 |
5 |
2 |
9 |
8 |
1 |
0 |
0 |
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6 |
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2.25 |
2.49 |
77.6 |
-1.02 |
-0.39 |
13.7 |
90 |
8 |
2 |
8 |
7 |
2 |
0 |
0 |
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7 |
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2.94 |
3.82 |
81.1 |
-1.67 |
-0.37 |
23.3 |
89 |
11 |
5 |
8 |
8 |
1 |
0 |
0 |
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Residue-type_colouring |
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Positive
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Negative
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Neutral
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Aliphatic
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Aromatic
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Pro & Gly
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Cysteine
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H,K,R
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D,E
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S,T,N,Q
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A,V,L,I,M
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F,Y,W
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P,G
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C
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MOLE 2.0 program