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PDBsum entry 2c8c
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Pore analysis for: 2c8c calculated with  MOLE 2.0
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PDB id
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2c8c
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Pores calculated on whole structure |
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Pores calculated excluding ligands
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11 pores,
coloured by radius |
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21 pores,
coloured by radius
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21 pores,
coloured as in
list below
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Pores are connected internal spaces going through the structure. Only pores longer than 25 Å are shown. |
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Free R
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Length
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HPathy
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HPhob
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Polar
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Rel Mut
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Residue..type
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Ligands
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Radius |
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1 |
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1.82 |
2.01 |
29.4 |
0.08 |
-0.03 |
9.9 |
92 |
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2 |
2 |
6 |
6 |
2 |
0 |
0 |
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NAD 1248 A
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2 |
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1.19 |
2.02 |
39.0 |
-2.44 |
-0.25 |
31.2 |
77 |
5 |
3 |
1 |
3 |
3 |
0 |
0 |
ADP 1247 D
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3 |
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3.09 |
3.19 |
47.3 |
-1.79 |
-0.34 |
25.5 |
76 |
6 |
4 |
2 |
6 |
3 |
1 |
0 |
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4 |
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3.14 |
3.30 |
49.0 |
-1.73 |
-0.39 |
20.1 |
86 |
8 |
1 |
6 |
7 |
3 |
0 |
0 |
ADP 1247 D
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5 |
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2.67 |
4.04 |
50.6 |
-1.89 |
-0.33 |
21.0 |
83 |
5 |
3 |
4 |
5 |
3 |
1 |
0 |
NAD 1252 C
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6 |
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2.89 |
4.29 |
52.6 |
-1.02 |
-0.44 |
12.3 |
86 |
3 |
3 |
7 |
7 |
1 |
2 |
0 |
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7 |
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2.70 |
3.16 |
53.3 |
-1.00 |
-0.43 |
12.0 |
91 |
2 |
4 |
8 |
7 |
1 |
1 |
0 |
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8 |
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2.88 |
4.28 |
56.8 |
-1.08 |
-0.19 |
17.2 |
83 |
6 |
3 |
5 |
8 |
2 |
2 |
0 |
ADP 1247 D
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9 |
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2.92 |
3.78 |
63.1 |
-1.57 |
-0.44 |
19.4 |
87 |
8 |
4 |
8 |
6 |
2 |
0 |
0 |
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10 |
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2.68 |
2.97 |
66.6 |
-1.21 |
-0.37 |
15.2 |
90 |
9 |
3 |
9 |
5 |
1 |
0 |
0 |
ADP 1247 D
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11 |
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1.82 |
2.05 |
71.6 |
-0.74 |
-0.31 |
12.8 |
92 |
5 |
3 |
12 |
9 |
1 |
1 |
0 |
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12 |
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2.70 |
3.14 |
73.3 |
-1.04 |
-0.30 |
14.0 |
94 |
7 |
4 |
11 |
8 |
1 |
0 |
0 |
ADP 1247 D
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13 |
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2.32 |
2.61 |
73.2 |
-1.08 |
-0.39 |
14.6 |
88 |
6 |
2 |
10 |
7 |
1 |
2 |
0 |
NAD 1248 A
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14 |
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2.71 |
3.14 |
73.6 |
-1.62 |
-0.39 |
20.4 |
90 |
8 |
5 |
10 |
9 |
2 |
0 |
0 |
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15 |
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1.80 |
2.07 |
78.4 |
-1.08 |
-0.21 |
20.0 |
87 |
9 |
4 |
9 |
11 |
3 |
1 |
0 |
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16 |
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1.91 |
2.07 |
79.6 |
-0.66 |
-0.15 |
15.4 |
91 |
8 |
3 |
11 |
11 |
2 |
1 |
0 |
ADP 1247 D
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17 |
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1.80 |
2.06 |
80.6 |
-0.74 |
-0.27 |
12.9 |
94 |
5 |
4 |
14 |
12 |
1 |
1 |
0 |
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18 |
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2.00 |
2.31 |
83.6 |
-0.94 |
-0.11 |
18.4 |
86 |
8 |
4 |
8 |
9 |
3 |
2 |
0 |
NAD 1252 C
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19 |
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2.68 |
2.97 |
85.6 |
-1.51 |
-0.45 |
18.3 |
88 |
9 |
4 |
9 |
6 |
2 |
0 |
0 |
NAD 1252 C
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20 |
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2.59 |
2.70 |
90.0 |
-1.35 |
-0.27 |
19.8 |
86 |
10 |
4 |
7 |
8 |
3 |
0 |
0 |
NAD 1252 C ADP 1247 D
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21 |
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1.91 |
4.31 |
129.6 |
-1.97 |
-0.39 |
24.6 |
82 |
15 |
8 |
9 |
9 |
4 |
1 |
0 |
NAD 1248 B NAD 1252 C
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Residue-type_colouring |
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Positive
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Negative
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Neutral
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Aliphatic
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Aromatic
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Pro & Gly
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Cysteine
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H,K,R
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D,E
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S,T,N,Q
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A,V,L,I,M
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F,Y,W
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P,G
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C
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MOLE 2.0 program