spacer
spacer

PDBsum entry 2c8c

Go to PDB code: 
Top Page protein ligands Protein-protein interface(s) tunnels links
Tunnel analysis for: 2c8c calculated with MOLE 2.0 PDB id
2c8c
Tunnels calculated on whole structure Tunnels calculated excluding ligands

View options
MOLEonline 2.0 manipulation
and
visualization
with HETATM:
without HETATM:
 
2 tunnels, coloured by tunnel radius 4 tunnels, coloured by tunnel radius 4 tunnels, coloured as in
list below
Tunnels are interior spaces connected with the protein surrounding. Only channels longer than 15 Å are shown.
Tunnels
Free R
Length
HPathy
HPhob
Polar
Rel Mut
Residue..type
Ligands
Radius
1 1.12 3.49 41.4 -0.01 0.52 15.5 82 3 3 2 8 5 0 0  ADP 1247 D
2 1.07 3.57 51.8 0.44 0.67 10.8 76 6 2 0 8 6 0 0  ADP 1247 D
3 1.10 3.50 56.5 -0.04 0.22 9.4 85 4 3 5 8 5 0 0  ADP 1247 D
4 1.21 1.36 15.1 0.70 0.08 6.5 64 0 1 0 3 3 0 0  

Residue-type_colouring
Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine
H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C

Acknowledgement
Tunnels were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.
spacer
spacer