 |
PDBsum entry 2c7e
|
|
|
|
 |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
 |
|
|
|
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
|
|
|
|
|
|
|
|
|
|
Tunnel analysis for: 2c7e calculated with MOLE 2.0
|
PDB id
|
|
|
|
2c7e
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
 |
Tunnels calculated on whole structure |
 |
Tunnels calculated excluding ligands
|
|
|
 |
 |
 |
 |
 |
|
 |
|
|
|
 |
 |
|
 |
|
|
|
 |
8 tunnels,
coloured by tunnel radius |
 |
8 tunnels,
coloured by
tunnel radius
|
8 tunnels,
coloured as in list below
|
|
|
 |
 |
 |
Tunnels are interior spaces connected with the protein surrounding. Only channels longer than 15 Å are shown. |
|
|
 |
|
|
|
 |
Free R
|
 |
|
|
|
|
 |
Length
|
 |
|
|
|
|
 |
HPathy
|
 |
|
|
|
|
 |
HPhob
|
 |
|
|
|
|
 |
Polar
|
 |
|
|
|
|
 |
Rel Mut
|
 |
|
|
|
|
 |
Residue..type
|
 |
|
|
|
|
 |
Ligands
|
 |
|
|
|
|
|
 |
Radius |
 |
1 |
 |
1.70 |
1.69 |
30.4 |
0.10 |
-0.17 |
9.2 |
90 |
 |
0 |
2 |
2 |
8 |
0 |
2 |
0 |
 |
ATP 551 E
|
 |
 |
2 |
 |
1.70 |
1.69 |
30.4 |
0.10 |
-0.17 |
9.2 |
90 |
0 |
2 |
2 |
8 |
0 |
2 |
0 |
ATP 551 G
|
 |
3 |
 |
1.57 |
1.57 |
39.1 |
-1.54 |
-0.59 |
20.6 |
84 |
3 |
5 |
1 |
5 |
0 |
1 |
0 |
K 549 E MG 550 E ATP 551 E
|
 |
4 |
 |
1.57 |
1.57 |
39.2 |
-1.54 |
-0.59 |
20.6 |
84 |
3 |
5 |
1 |
5 |
0 |
1 |
0 |
K 549 G MG 550 G ATP 551 G
|
 |
5 |
 |
1.62 |
1.60 |
44.6 |
-1.49 |
-0.59 |
21.0 |
86 |
5 |
7 |
2 |
6 |
0 |
1 |
0 |
K 549 E MG 550 E ATP 551 E
|
 |
6 |
 |
1.62 |
1.60 |
44.6 |
-1.49 |
-0.59 |
21.0 |
86 |
5 |
7 |
2 |
6 |
0 |
1 |
0 |
K 549 G MG 550 G ATP 551 G
|
 |
7 |
 |
1.64 |
1.62 |
52.3 |
-1.56 |
-0.62 |
21.7 |
89 |
3 |
6 |
3 |
6 |
0 |
1 |
0 |
K 549 E MG 550 E ATP 551 E
|
 |
8 |
 |
1.64 |
1.62 |
52.3 |
-1.56 |
-0.62 |
21.7 |
89 |
3 |
6 |
3 |
6 |
0 |
1 |
0 |
K 549 G MG 550 G ATP 551 G
|
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
Residue-type_colouring |
 |
|
 |
|
Positive
|
Negative
|
Neutral
|
Aliphatic
|
Aromatic
|
Pro & Gly
|
Cysteine
|
|
H,K,R
|
D,E
|
S,T,N,Q
|
A,V,L,I,M
|
F,Y,W
|
P,G
|
C
|
|
|
 |