PDBsum entry 2c7d Go to PDB code:  Pore analysis for: 2c7d calculated with MOLE 2.0 PDB id 2c7d Pores calculated on whole structure Pores calculated excluding ligands View options MOLEonline 2.0 manipulation and visualization with HETATM: without HETATM:   30 pores, coloured by radius 30 pores, coloured by radius 30 pores, coloured as in list below Pores are connected internal spaces going through the structure. Only pores longer than 25 Å are shown. Pores Free R Length HPathy HPhob Polar Rel Mut Residue..type Ligands Radius 1 2.97 5.00 31.5 -1.96 -0.44 33.3 80 6 3 0 2 0 0 0   2 1.72 1.85 34.2 0.15 0.00 14.3 87 1 3 2 6 0 1 0   3 3.67 3.81 48.8 -1.74 -0.59 24.0 80 8 5 1 5 0 0 0   4 1.58 1.75 49.9 -2.34 -0.71 28.5 86 7 6 5 2 0 1 0   5 1.97 2.93 80.9 -1.50 -0.36 22.5 79 7 8 6 8 2 2 0   6 2.99 3.47 81.1 -1.51 -0.36 23.0 82 7 6 2 8 2 2 0   7 1.76 1.87 82.7 -0.55 -0.16 20.2 84 6 9 3 10 1 1 0   8 2.99 3.47 85.2 -1.12 -0.26 22.1 83 7 9 1 8 2 3 0   9 1.31 1.30 85.9 -1.69 -0.56 14.5 79 6 2 5 6 2 1 0   10 1.26 2.51 87.1 -2.41 -0.59 28.5 78 8 8 4 5 5 2 0   11 1.69 1.69 105.0 -1.15 -0.39 20.4 83 7 7 4 12 1 4 0   12 1.97 2.76 110.2 -2.04 -0.49 23.0 80 10 9 7 9 3 4 0   13 2.93 4.07 122.6 -2.12 -0.62 24.1 81 10 12 8 6 4 2 0   14 1.89 1.96 123.1 -0.83 -0.28 19.6 86 12 8 4 17 0 1 0   15 1.34 1.49 136.2 -0.38 -0.26 13.8 92 7 5 5 10 0 1 0   16 1.29 2.63 145.0 -2.30 -0.56 29.8 83 13 16 5 8 3 2 0   17 2.06 2.73 162.6 -2.08 -0.56 27.3 80 13 16 7 9 6 2 0   18 1.31 2.56 167.9 -2.20 -0.70 27.6 83 12 17 5 6 3 0 0   19 1.86 1.91 169.8 -2.16 -0.68 23.4 82 10 17 8 7 3 2 0   20 2.00 2.68 179.0 -2.18 -0.55 25.1 82 15 19 11 12 4 4 0   21 1.67 1.79 185.4 -1.14 -0.33 21.0 85 15 13 7 19 1 4 0   22 2.10 2.68 188.3 -2.05 -0.56 25.9 84 15 20 9 9 3 2 0   23 1.46 3.25 179.0 -1.37 -0.35 25.4 82 10 14 3 11 1 1 0   24 2.00 2.70 189.7 -2.12 -0.62 23.4 82 12 14 9 9 3 2 0   25 1.51 1.64 194.0 -1.37 -0.35 22.4 80 18 16 7 13 3 7 0   26 1.81 1.84 205.8 -1.98 -0.69 24.3 85 14 21 9 7 1 0 0   27 1.62 2.88 263.7 -1.30 -0.38 20.9 82 22 21 16 22 5 0 0   28 1.54 1.79 281.2 -1.51 -0.47 23.7 82 16 23 13 13 5 4 0   29 1.88 1.88 293.7 -1.47 -0.54 20.1 83 21 22 14 15 7 3 0   30 1.17 1.98 347.3 -1.71 -0.60 25.1 86 20 41 13 24 1 0 1   Residue-type_colouring Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C Acknowledgement Pores were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.