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PDBsum entry 2c7a

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Top Page protein dna_rna metals Protein-protein interface(s) tunnels links
Tunnel analysis for: 2c7a calculated with MOLE 2.0 PDB id
2c7a
Tunnels calculated on whole structure Tunnels calculated excluding ligands

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4 tunnels, coloured by tunnel radius 4 tunnels, coloured by tunnel radius 4 tunnels, coloured as in
list below
Tunnels are interior spaces connected with the protein surrounding. Only channels longer than 15 Å are shown.
Tunnels
Free R
Length
HPathy
HPhob
Polar
Rel Mut
Residue..type
Ligands
Radius
1 1.21 1.40 22.1 0.14 -0.22 7.4 73 2 1 1 2 0 0 4  
2 1.23 1.56 22.2 0.27 -0.20 7.3 70 2 1 1 2 0 0 5  
3 1.22 1.47 25.4 0.30 -0.20 6.4 75 2 1 1 3 0 0 4  
4 1.26 1.56 25.5 0.40 -0.16 7.0 74 2 2 1 3 0 0 5  

Residue-type_colouring
Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine
H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C

Acknowledgement
Tunnels were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.
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