PDBsum entry 2c6t Go to PDB code:  Tunnel analysis for: 2c6t calculated with MOLE 2.0 PDB id 2c6t Tunnels calculated on whole structure Tunnels calculated excluding ligands View options MOLEonline 2.0 manipulation and visualization with HETATM: without HETATM:   5 tunnels, coloured by tunnel radius 4 tunnels, coloured by tunnel radius 4 tunnels, coloured as in list below Tunnels are interior spaces connected with the protein surrounding. Only channels longer than 15 Å are shown. Tunnels Free R Length HPathy HPhob Polar Rel Mut Residue..type Ligands Radius 1 1.20 1.39 21.1 0.23 0.27 18.7 90 2 2 0 5 0 0 0   2 1.36 2.40 17.4 1.22 0.20 5.6 80 1 0 1 6 1 0 0   3 1.35 2.48 19.2 1.65 0.36 4.6 75 1 0 0 6 1 1 0   4 1.13 1.27 22.8 1.00 0.17 6.5 79 2 0 1 7 1 0 0   Residue-type_colouring Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C Acknowledgement Tunnels were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.