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PDBsum entry 2c4h

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Hydrolase PDB id
2c4h
Contents
Protein chain
533 a.a.
Ligands
NAG ×2
PGE ×2
AT3 ×2
ACE
ACT
Metals
_CL ×11
Waters ×948

References listed in PDB file
Key reference
Title Structural insights into substrate traffic and inhibition in acetylcholinesterase.
Authors J.P.Colletier, D.Fournier, H.M.Greenblatt, J.Stojan, J.L.Sussman, G.Zaccai, I.Silman, M.Weik.
Ref. EMBO J, 2006, 25, 2746-2756. [DOI no: 10.1038/sj.emboj.7601175]
PubMed id 16763558
Abstract
Acetylcholinesterase (AChE) terminates nerve-impulse transmission at cholinergic synapses by rapid hydrolysis of the neurotransmitter, acetylcholine. Substrate traffic in AChE involves at least two binding sites, the catalytic and peripheral anionic sites, which have been suggested to be allosterically related and involved in substrate inhibition. Here, we present the crystal structures of Torpedo californica AChE complexed with the substrate acetylthiocholine, the product thiocholine and a nonhydrolysable substrate analogue. These structures provide a series of static snapshots of the substrate en route to the active site and identify, for the first time, binding of substrate and product at both the peripheral and active sites. Furthermore, they provide structural insight into substrate inhibition in AChE at two different substrate concentrations. Our structural data indicate that substrate inhibition at moderate substrate concentration is due to choline exit being hindered by a substrate molecule bound at the peripheral site. At the higher concentration, substrate inhibition arises from prevention of exit of acetate due to binding of two substrate molecules within the active-site gorge.
Figure 1.
Figure 1 3D structure of native TcAChE (pdb access code 1EA5), highlighting the catalytic triad in red, Trp84 in the CAS, Trp279 at the PAS, and the bottleneck residue Phe330 in blue.
Figure 8.
Figure 8 Molecular surfaces of the active-site gorge in native TcAChE (A), and in the OTMA/TcAChE (B), 20 mM TCh/TcAChE (C), 20 mM ATCh/TcAChE (D) and 500 mM ATCh/TcAChE (E) complexes. OTMA, ATCh and TCh are shown as yellow sticks, as is the acetyl group on Ser200 in (D, E).
The above figures are reprinted from an Open Access publication published by Macmillan Publishers Ltd: EMBO J (2006, 25, 2746-2756) copyright 2006.
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