PDBsum entry 2c4d Go to PDB code:  Tunnel analysis for: 2c4d calculated with MOLE 2.0 PDB id 2c4d Tunnels calculated on whole structure Tunnels calculated excluding ligands View options MOLEonline 2.0 manipulation and visualization with HETATM: without HETATM:   3 tunnels, coloured by tunnel radius 3 tunnels, coloured by tunnel radius 3 tunnels, coloured as in list below Tunnels are interior spaces connected with the protein surrounding. Only channels longer than 15 Å are shown. Tunnels Free R Length HPathy HPhob Polar Rel Mut Residue..type Ligands Radius 1 1.28 1.32 22.0 -0.62 -0.29 13.3 79 2 2 1 4 1 2 0   2 1.29 1.35 47.5 1.08 0.07 3.8 79 1 2 1 12 1 2 1   3 1.39 1.39 15.2 0.35 0.32 13.0 81 2 1 2 2 1 0 0   Residue-type_colouring Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C Acknowledgement Tunnels were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.