 |
PDBsum entry 2c3y
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
 |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Pore analysis for: 2c3y calculated with  MOLE 2.0
|
PDB id
|
|
|
|
2c3y
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Pores calculated on whole structure |
|
Pores calculated excluding ligands
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
 |
|
|
|
|
|
7 pores,
coloured by radius |
|
10 pores,
coloured by radius
|
10 pores,
coloured as in
list below
|
|
|
|
|
|
Pores are connected internal spaces going through the structure. Only pores longer than 25 Å are shown. |
|
|
|
|
|
|
|
Free R
|
|
|
|
|
|
|
Length
|
|
|
|
|
|
|
HPathy
|
|
|
|
|
|
|
HPhob
|
|
|
|
|
|
|
Polar
|
|
|
|
|
|
|
Rel Mut
|
|
|
|
|
|
|
Residue..type
|
|
|
|
|
|
|
Ligands
|
|
|
|
|
|
|
 |
Radius |
 |
1 |
 |
1.47 |
1.47 |
28.2 |
-1.95 |
-0.45 |
23.0 |
87 |
|
4 |
3 |
3 |
3 |
1 |
0 |
0 |
|
|
 |
|
2 |
 |
1.78 |
1.78 |
29.2 |
-1.91 |
-0.58 |
23.5 |
84 |
4 |
3 |
1 |
4 |
0 |
3 |
0 |
|
|
3 |
 |
2.99 |
2.98 |
31.0 |
-0.93 |
-0.32 |
19.7 |
81 |
4 |
3 |
0 |
4 |
0 |
2 |
0 |
|
|
4 |
 |
3.22 |
3.36 |
42.7 |
-0.48 |
-0.05 |
15.8 |
84 |
4 |
2 |
1 |
4 |
1 |
2 |
0 |
|
|
5 |
 |
1.18 |
1.53 |
49.1 |
-1.94 |
-0.50 |
24.2 |
81 |
9 |
8 |
3 |
5 |
4 |
1 |
0 |
|
|
6 |
 |
1.19 |
1.19 |
65.2 |
-0.48 |
-0.09 |
14.4 |
84 |
6 |
5 |
6 |
10 |
1 |
2 |
0 |
|
|
7 |
 |
1.19 |
1.19 |
65.7 |
-1.21 |
-0.50 |
18.1 |
85 |
4 |
9 |
8 |
8 |
1 |
2 |
2 |
|
|
8 |
 |
2.19 |
2.29 |
74.5 |
-0.96 |
-0.28 |
19.6 |
82 |
5 |
10 |
2 |
9 |
2 |
3 |
1 |
|
|
9 |
 |
1.24 |
1.36 |
81.1 |
-1.00 |
-0.14 |
17.9 |
83 |
6 |
7 |
6 |
11 |
1 |
4 |
0 |
|
 |
10 |
 |
1.31 |
1.31 |
98.8 |
-1.50 |
-0.48 |
18.3 |
79 |
4 |
2 |
2 |
5 |
2 |
2 |
0 |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
 |
|
|
 |
Residue-type_colouring |
 |
|
|
|
Positive
|
Negative
|
Neutral
|
Aliphatic
|
Aromatic
|
Pro & Gly
|
Cysteine
|
|
H,K,R
|
D,E
|
S,T,N,Q
|
A,V,L,I,M
|
F,Y,W
|
P,G
|
C
|
|
|
|
MOLE 2.0 program