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PDBsum entry 2c3h

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Top Page protein ligands Protein-protein interface(s) pores links
Pore analysis for: 2c3h calculated with MOLE 2.0 PDB id
2c3h
Pores calculated on whole structure Pores calculated excluding ligands

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9 pores, coloured by radius 11 pores, coloured by radius 11 pores, coloured as in
list below
Pores are connected internal spaces going through the structure. Only pores longer than 25 Å are shown.
Pores
Free R
Length
HPathy
HPhob
Polar
Rel Mut
Residue..type
Ligands
Radius
1 2.92 4.19 26.4 -2.61 -0.52 28.6 76 0 6 2 0 4 2 0  GLC 2 I GLC 1 L GLC 2 L
2 2.37 2.94 28.4 -1.41 0.05 10.5 63 0 3 1 0 6 3 0  GLC 1 J GLC 2 J GLC 1 N GLC 2 N
3 2.48 2.48 33.3 -1.69 -0.23 14.2 66 1 4 1 0 6 3 0  GLC 1 J GLC 2 J GLC 2 N GLC 2 P
4 1.80 4.24 35.2 -2.09 -0.33 22.1 66 2 6 0 0 5 2 0  GLC 2 J GLC 1 N GLC 2 N GLC 2 O
5 2.23 2.42 35.8 -1.73 -0.20 15.1 73 0 6 3 0 6 3 0  GLC 2 I GLC 2 K GLC 1 M GLC 2 M
6 2.24 2.41 37.5 -1.94 -0.32 19.0 73 0 6 3 0 6 3 0  GLC 2 K GLC 1 L GLC 2 L GLC 1 M GLC 2 M
7 1.81 3.98 37.7 -2.04 -0.33 21.2 63 2 6 0 0 6 3 0  GLC 1 J GLC 2 J GLC 2 N GLC 2 O
8 1.67 1.66 38.4 -0.23 0.00 17.4 73 3 6 1 2 6 0 0  SO4 1097 A
9 2.29 2.49 41.8 -1.70 -0.24 15.4 72 1 5 2 0 6 3 0  GLC 2 J GLC 1 N GLC 2 N GLC 2 P
10 1.71 1.89 52.2 -2.41 -0.59 31.0 76 4 10 1 0 3 1 0  GLC 1 N
11 1.73 1.89 76.2 -2.14 -0.35 23.4 73 5 11 1 0 6 2 0  GLC 2 J GLC 1 N GLC 2 N GLC 2 P

Residue-type_colouring
Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine
H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C

Acknowledgement
Pores were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.
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