spacer
spacer

PDBsum entry 2c1v

Go to PDB code: 
Top Page protein ligands metals Protein-protein interface(s) pores links
Pore analysis for: 2c1v calculated with MOLE 2.0 PDB id
2c1v
Pores calculated on whole structure Pores calculated excluding ligands

View options
MOLEonline 2.0 manipulation
and
visualization
with HETATM:
without HETATM:
 
2 pores, coloured by radius 5 pores, coloured by radius 5 pores, coloured as in
list below
Pores are connected internal spaces going through the structure. Only pores longer than 25 Å are shown.
Pores
Free R
Length
HPathy
HPhob
Polar
Rel Mut
Residue..type
Ligands
Radius
1 1.73 2.52 29.1 -0.91 -0.50 10.9 82 2 0 2 5 1 2 0  
2 1.17 1.15 34.4 -1.14 -0.54 12.4 81 2 1 1 4 1 1 0  
3 1.52 1.69 52.1 -0.28 0.12 10.1 74 5 1 3 12 5 3 2  HEC 401 A HEC 402 A
4 1.58 1.73 52.3 -0.03 0.19 9.1 75 5 1 3 13 5 3 2  HEC 401 B HEC 402 B
5 1.32 1.42 57.4 -0.25 0.03 15.8 74 6 2 2 9 4 6 2  HEC 401 A EDO 1339 A HEC 401 B

Residue-type_colouring
Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine
H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C

Acknowledgement
Pores were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.
spacer
spacer