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PDBsum entry 2c00

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Top Page protein ligands Protein-protein interface(s) tunnels links
Tunnel analysis for: 2c00 calculated with MOLE 2.0 PDB id
2c00
Tunnels calculated on whole structure Tunnels calculated excluding ligands

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6 tunnels, coloured by tunnel radius 5 tunnels, coloured by tunnel radius 5 tunnels, coloured as in
list below
Tunnels are interior spaces connected with the protein surrounding. Only channels longer than 15 Å are shown.
Tunnels
Free R
Length
HPathy
HPhob
Polar
Rel Mut
Residue..type
Ligands
Radius
1 1.39 1.39 17.4 -0.17 -0.36 6.4 87 2 0 0 4 0 2 0  
2 1.40 1.40 18.5 0.08 -0.25 6.0 87 3 0 0 4 0 2 0  
3 1.35 1.52 19.0 0.12 -0.27 4.5 85 1 0 0 5 1 2 0  
4 1.42 1.42 20.0 -0.29 -0.36 8.0 88 2 0 0 5 0 2 0  
5 1.53 1.71 15.3 0.12 0.06 11.6 86 1 2 2 4 1 1 0  

Residue-type_colouring
Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine
H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C

Acknowledgement
Tunnels were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.
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