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PDBsum entry 2bz3
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Tunnel analysis for: 2bz3 calculated with  MOLE 2.0
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PDB id
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2bz3
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Tunnels calculated on whole structure |
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Tunnels calculated excluding ligands
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12 tunnels,
coloured by tunnel radius |
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9 tunnels,
coloured by
tunnel radius
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9 tunnels,
coloured as in
list below
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Tunnels are interior spaces connected with the protein surrounding. Only channels longer than 15 Å are shown. |
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Free R
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Length
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HPathy
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HPhob
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Polar
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Rel Mut
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Residue..type
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Ligands
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Radius |
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1 |
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1.24 |
1.54 |
34.0 |
0.99 |
0.24 |
5.2 |
83 |
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1 |
2 |
1 |
9 |
3 |
1 |
1 |
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DAO 1407 A
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2 |
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1.21 |
1.28 |
23.5 |
-0.68 |
-0.42 |
11.2 |
81 |
0 |
3 |
0 |
5 |
2 |
1 |
0 |
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3 |
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1.14 |
1.14 |
19.4 |
-0.50 |
-0.19 |
7.6 |
80 |
2 |
0 |
1 |
4 |
1 |
0 |
0 |
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4 |
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1.14 |
1.14 |
19.9 |
-0.11 |
-0.26 |
3.7 |
79 |
2 |
0 |
1 |
4 |
1 |
0 |
0 |
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5 |
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1.12 |
1.12 |
23.9 |
-0.73 |
-0.04 |
14.7 |
78 |
3 |
0 |
1 |
4 |
1 |
1 |
0 |
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6 |
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1.20 |
1.77 |
18.2 |
-0.35 |
-0.29 |
4.9 |
83 |
2 |
0 |
1 |
3 |
1 |
0 |
0 |
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7 |
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1.20 |
1.74 |
18.5 |
-0.80 |
-0.25 |
10.0 |
84 |
2 |
0 |
1 |
3 |
1 |
0 |
0 |
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8 |
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1.28 |
1.75 |
15.0 |
0.00 |
0.04 |
11.6 |
81 |
1 |
3 |
0 |
4 |
1 |
0 |
0 |
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9 |
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1.14 |
1.14 |
15.9 |
-0.03 |
0.09 |
11.0 |
79 |
1 |
3 |
0 |
4 |
1 |
0 |
0 |
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Residue-type_colouring |
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Positive
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Negative
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Neutral
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Aliphatic
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Aromatic
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Pro & Gly
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Cysteine
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H,K,R
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D,E
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S,T,N,Q
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A,V,L,I,M
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F,Y,W
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P,G
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C
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MOLE 2.0 program