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PDBsum entry 2bob
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Tunnel analysis for: 2bob calculated with  MOLE 2.0
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PDB id
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2bob
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Tunnels calculated on whole structure |
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Tunnels calculated excluding ligands
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7 tunnels,
coloured by tunnel radius |
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7 tunnels,
coloured by
tunnel radius
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7 tunnels,
coloured as in
list below
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Tunnels are interior spaces connected with the protein surrounding. Only channels longer than 15 Å are shown. |
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Free R
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Length
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HPathy
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HPhob
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Polar
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Rel Mut
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Residue..type
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Ligands
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Radius |
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1 |
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1.20 |
1.34 |
18.0 |
-1.35 |
-0.10 |
25.9 |
77 |
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2 |
2 |
1 |
5 |
1 |
0 |
0 |
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2 |
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1.20 |
1.34 |
22.9 |
-0.29 |
0.19 |
17.4 |
76 |
3 |
2 |
0 |
6 |
2 |
0 |
0 |
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3 |
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1.48 |
1.64 |
19.8 |
0.33 |
-0.34 |
3.0 |
98 |
1 |
0 |
4 |
2 |
0 |
0 |
0 |
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4 |
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1.50 |
3.19 |
21.7 |
-0.30 |
-0.40 |
7.5 |
96 |
1 |
0 |
5 |
3 |
0 |
0 |
0 |
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5 |
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1.41 |
1.47 |
16.3 |
-0.39 |
-0.31 |
8.4 |
88 |
1 |
0 |
3 |
2 |
1 |
1 |
0 |
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6 |
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1.41 |
1.51 |
22.4 |
0.25 |
-0.05 |
1.8 |
77 |
0 |
0 |
1 |
3 |
2 |
3 |
0 |
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7 |
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1.29 |
1.39 |
15.3 |
-0.18 |
-0.31 |
4.3 |
92 |
1 |
1 |
1 |
3 |
0 |
1 |
0 |
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Residue-type_colouring |
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Positive
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Negative
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Neutral
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Aliphatic
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Aromatic
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Pro & Gly
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Cysteine
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H,K,R
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D,E
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S,T,N,Q
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A,V,L,I,M
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F,Y,W
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P,G
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C
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MOLE 2.0 program