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PDBsum entry 2bf4
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Pore analysis for: 2bf4 calculated with  MOLE 2.0
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PDB id
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2bf4
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Pores calculated on whole structure |
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Pores calculated excluding ligands
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25 pores,
coloured by radius |
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26 pores,
coloured by radius
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26 pores,
coloured as in
list below
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Pores are connected internal spaces going through the structure. Only pores longer than 25 Å are shown. |
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Free R
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Length
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HPathy
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HPhob
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Polar
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Rel Mut
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Residue..type
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Ligands
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Radius |
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1 |
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1.53 |
2.08 |
29.4 |
-1.60 |
-0.51 |
17.2 |
83 |
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3 |
2 |
4 |
2 |
1 |
0 |
1 |
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2 |
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2.09 |
2.23 |
35.4 |
-0.91 |
-0.28 |
14.8 |
75 |
3 |
4 |
2 |
3 |
3 |
2 |
0 |
FAD 750 B FMN 752 B NAP 753 B
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3 |
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1.59 |
2.87 |
39.1 |
-1.95 |
-0.38 |
20.6 |
82 |
3 |
5 |
4 |
1 |
2 |
0 |
0 |
FAD 750 B FMN 751 B
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4 |
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2.52 |
2.55 |
40.5 |
-1.89 |
-0.18 |
22.0 |
76 |
4 |
6 |
1 |
1 |
5 |
0 |
0 |
FAD 750 B FMN 751 B FMN 752 B NAP 753 B
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5 |
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2.10 |
2.25 |
40.7 |
-0.91 |
-0.24 |
17.3 |
75 |
5 |
2 |
1 |
3 |
3 |
2 |
0 |
FAD 750 A NAP 753 A
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6 |
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1.91 |
1.91 |
42.3 |
-1.46 |
-0.61 |
14.1 |
80 |
3 |
4 |
3 |
1 |
2 |
2 |
0 |
FAD 750 B FMN 752 B NAP 753 B
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7 |
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1.54 |
1.73 |
43.4 |
-1.35 |
-0.54 |
15.8 |
84 |
4 |
3 |
6 |
3 |
2 |
1 |
0 |
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8 |
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1.91 |
1.91 |
48.0 |
-1.52 |
-0.70 |
12.8 |
87 |
3 |
4 |
5 |
2 |
0 |
3 |
0 |
FAD 750 B FMN 752 B NAP 753 B
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9 |
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1.77 |
1.87 |
50.1 |
-1.16 |
-0.27 |
18.2 |
79 |
7 |
4 |
4 |
6 |
3 |
2 |
0 |
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10 |
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1.74 |
2.46 |
52.3 |
-1.40 |
-0.56 |
16.5 |
80 |
4 |
5 |
2 |
4 |
1 |
3 |
0 |
FAD 750 A FMN 752 A
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11 |
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2.11 |
2.20 |
53.3 |
-1.54 |
-0.28 |
18.4 |
78 |
5 |
7 |
3 |
3 |
4 |
2 |
0 |
FAD 750 B FMN 751 B FMN 752 B NAP 753 B
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12 |
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1.54 |
2.14 |
53.9 |
-1.70 |
-0.48 |
18.4 |
77 |
5 |
6 |
3 |
2 |
3 |
3 |
1 |
FAD 750 B FMN 752 B NAP 753 B
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13 |
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2.11 |
2.25 |
55.6 |
-1.33 |
-0.31 |
15.5 |
77 |
5 |
4 |
2 |
3 |
4 |
2 |
0 |
FAD 750 A FMN 751 A FMN 752 A NAP 753 A
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14 |
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1.49 |
1.47 |
56.7 |
-1.48 |
-0.39 |
19.3 |
78 |
8 |
3 |
7 |
3 |
5 |
1 |
1 |
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15 |
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1.75 |
2.32 |
57.7 |
-1.79 |
-0.55 |
21.4 |
80 |
6 |
6 |
3 |
1 |
1 |
3 |
0 |
FAD 750 A FMN 752 A NAP 753 A
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16 |
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2.13 |
3.12 |
58.6 |
-2.73 |
-0.77 |
27.2 |
83 |
5 |
7 |
4 |
0 |
0 |
1 |
0 |
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17 |
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1.44 |
1.67 |
59.3 |
-1.06 |
-0.36 |
13.2 |
79 |
5 |
5 |
5 |
4 |
5 |
2 |
0 |
FAD 750 B FMN 752 B NAP 753 B
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18 |
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2.17 |
2.30 |
60.4 |
-1.82 |
-0.25 |
22.4 |
77 |
7 |
4 |
3 |
0 |
4 |
2 |
0 |
FAD 750 A FMN 751 A FMN 752 A NAP 753 A
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19 |
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1.41 |
1.66 |
68.5 |
-0.98 |
-0.39 |
13.3 |
81 |
5 |
6 |
6 |
7 |
4 |
3 |
0 |
FAD 750 B FMN 752 B NAP 753 B
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20 |
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1.30 |
1.37 |
76.6 |
-0.69 |
-0.29 |
10.7 |
81 |
6 |
4 |
6 |
10 |
4 |
1 |
1 |
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21 |
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1.64 |
1.71 |
78.5 |
-1.14 |
-0.40 |
15.4 |
82 |
8 |
6 |
7 |
7 |
4 |
3 |
0 |
FAD 750 A FMN 752 A
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22 |
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1.62 |
1.74 |
82.0 |
-1.40 |
-0.35 |
16.6 |
80 |
9 |
6 |
7 |
4 |
6 |
2 |
0 |
FAD 750 A FMN 751 A FMN 752 A
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23 |
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1.55 |
1.75 |
83.9 |
-1.42 |
-0.39 |
18.9 |
82 |
10 |
7 |
8 |
4 |
4 |
3 |
0 |
FAD 750 A FMN 752 A NAP 753 A
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24 |
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2.17 |
3.09 |
91.9 |
-2.65 |
-0.62 |
28.5 |
80 |
8 |
7 |
5 |
0 |
2 |
2 |
0 |
NAP 753 B
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25 |
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1.76 |
1.85 |
98.5 |
-1.38 |
-0.43 |
16.6 |
80 |
5 |
10 |
7 |
7 |
3 |
3 |
0 |
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26 |
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1.75 |
1.89 |
118.4 |
-1.63 |
-0.39 |
19.5 |
78 |
9 |
7 |
7 |
6 |
5 |
4 |
0 |
NAP 753 B
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Residue-type_colouring |
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Positive
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Negative
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Neutral
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Aliphatic
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Aromatic
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Pro & Gly
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Cysteine
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H,K,R
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D,E
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S,T,N,Q
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A,V,L,I,M
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F,Y,W
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P,G
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C
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MOLE 2.0 program