PDBsum entry 2bd1 Go to PDB code:  Pore analysis for: 2bd1 calculated with MOLE 2.0 PDB id 2bd1 Pores calculated on whole structure Pores calculated excluding ligands View options MOLEonline 2.0 manipulation and visualization with HETATM: without HETATM:   3 pores, coloured by radius 3 pores, coloured by radius 3 pores, coloured as in list below Pores are connected internal spaces going through the structure. Only pores longer than 25 Å are shown. Pores Free R Length HPathy HPhob Polar Rel Mut Residue..type Ligands Radius 1 1.56 3.51 25.5 -1.73 -0.55 14.7 81 2 2 2 1 2 0 0   2 2.04 2.53 39.6 -0.46 -0.01 5.2 77 0 1 5 5 3 1 0   3 2.03 2.53 42.9 -1.06 -0.17 6.0 77 0 1 7 4 2 1 1   Residue-type_colouring Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C Acknowledgement Pores were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.