PDBsum entry 2bcn

Pore analysis for: 2bcn calculated with

MOLE 2.0

PDB id

2bcn

Pores calculated on whole structure

Pores calculated excluding ligands

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without HETATM:

2 pores, coloured by radius

7 pores, coloured by radius

7 pores, coloured as in
list below

Pores are connected internal spaces going through the structure. Only pores longer than 25 Å are shown.

Pores

Free R

Length

HPathy

HPhob

Polar

Rel Mut

Residue..type

Ligands

Radius

1

2.21

3.38

30.7

-0.70

0.12

14.0

78

4

3

1

4

2

1

0

2

1.33

1.65

44.0

-0.34

0.00

9.2

76

4

1

4

7

3

0

2

HEC 109 B

3

1.41

1.48

44.5

-0.78

-0.43

9.8

83

3

2

5

4

2

0

1

HEC 109 B

4

1.70

2.55

45.7

-1.82

-0.35

23.1

81

6

3

4

4

2

2

0

ZNH 295 C

5

1.63

3.33

55.2

-0.25

-0.06

8.2

77

2

2

3

8

4

1

1

HEC 109 B

6

1.42

1.45

91.2

-1.22

-0.51

13.7

82

5

5

6

7

2

1

1

HEC 109 B

7

1.67

2.68

101.8

-0.76

-0.25

12.1

78

4

5

4

11

4

2

1

HEC 109 B

Residue-type_colouring

Positive	Negative	Neutral	Aliphatic	Aromatic	Pro & Gly	Cysteine
H,K,R	D,E	S,T,N,Q	A,V,L,I,M	F,Y,W	P,G	C

Acknowledgement

Pores were calculated by

MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.