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PDBsum entry 2bcc

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Top Page protein ligands Protein-protein interface(s) tunnels links
Tunnel analysis for: 2bcc calculated with MOLE 2.0 PDB id
2bcc
Tunnels calculated on whole structure Tunnels calculated excluding ligands

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24 tunnels, coloured by tunnel radius 24 tunnels, coloured by tunnel radius 24 tunnels, coloured as in
list below
Tunnels are interior spaces connected with the protein surrounding. Only channels longer than 15 Å are shown.
Tunnels
Free R
Length
HPathy
HPhob
Polar
Rel Mut
Residue..type
Ligands
Radius
1 1.18 1.51 42.7 -0.31 -0.27 9.5 81 2 4 6 5 1 2 0  
2 1.16 1.55 44.4 0.43 0.05 10.9 76 2 6 3 7 1 2 0  
3 1.16 1.53 47.1 -0.10 -0.08 7.4 77 1 4 7 6 3 3 0  
4 1.17 1.61 47.7 -0.98 -0.54 17.7 91 1 4 4 4 0 0 0  UNK 105 I UNK 115 I UNK 117 I UNK 121 I UNK 208 I
UNK 209 I
5 1.16 1.62 48.7 -1.32 -0.75 16.2 92 1 5 7 3 0 1 0  UNK 209 I
6 1.16 1.64 50.6 -0.62 -0.44 16.6 85 1 7 4 5 0 2 0  UNK 209 I
7 1.17 1.63 53.1 -1.09 -0.53 13.6 86 0 5 8 4 2 2 0  UNK 209 I
8 1.17 1.60 52.7 -1.33 -0.69 18.2 96 0 5 8 3 0 0 0  UNK 105 I UNK 115 I UNK 117 I UNK 121 I UNK 208 I
UNK 209 I
9 1.16 1.61 53.6 -1.71 -0.74 15.0 89 0 6 8 3 1 1 0  UNK 115 I UNK 117 I UNK 119 I UNK 120 I UNK 208 I
UNK 209 I
10 1.17 1.63 53.8 -1.93 -0.78 19.7 87 1 7 6 3 1 1 0  UNK 115 I UNK 117 I UNK 119 I UNK 120 I UNK 208 I
UNK 209 I
11 1.19 1.44 56.1 -0.28 -0.28 9.2 84 1 6 9 6 2 2 0  
12 1.17 1.60 57.9 -1.67 -0.74 17.0 86 1 7 7 2 1 1 0  UNK 115 I UNK 117 I UNK 119 I UNK 120 I UNK 208 I
UNK 209 I UNK 310 I UNK 311 I
13 1.20 1.63 59.4 -0.96 -0.22 14.0 80 4 4 4 7 2 1 0  UNK 208 I UNK 209 I UNK 210 I
14 1.19 1.62 62.1 -1.09 -0.62 14.2 92 0 7 9 5 1 1 0  UNK 209 I
15 1.15 1.46 63.3 -0.47 -0.29 15.4 84 2 6 6 7 1 1 0  UNK 105 I UNK 115 I UNK 117 I UNK 121 I UNK 208 I
UNK 209 I
16 1.17 1.65 66.8 -1.32 -0.34 18.4 86 3 7 5 3 4 0 0  UNK 115 I UNK 117 I UNK 120 I UNK 208 I UNK 209 I
17 1.15 1.46 68.3 -0.69 -0.39 15.7 88 1 7 10 6 1 1 0  UNK 105 I UNK 115 I UNK 117 I UNK 121 I UNK 208 I
UNK 209 I
18 1.20 2.03 70.2 -0.78 -0.16 17.8 81 4 8 5 6 4 2 0  UNK 208 I UNK 209 I
19 1.17 1.54 70.0 -0.96 -0.43 13.6 85 1 7 10 6 2 2 0  UNK 115 I UNK 117 I UNK 119 I UNK 120 I UNK 208 I
UNK 209 I
20 1.16 1.58 72.6 -0.48 -0.05 12.5 77 5 4 5 9 3 2 0  UNK 208 I UNK 209 I UNK 210 I
21 1.27 2.64 18.0 1.73 0.65 6.4 79 1 1 0 5 1 1 0  
22 1.22 1.75 15.3 -0.95 0.00 17.3 78 3 2 0 1 2 0 0  
23 1.20 1.22 16.4 -0.35 -0.15 15.5 72 1 2 1 4 1 0 0  
24 1.15 2.53 15.3 -0.69 -0.22 14.1 82 2 1 2 2 2 0 0  

Residue-type_colouring
Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine
H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C

Acknowledgement
Tunnels were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.
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