spacer
spacer

PDBsum entry 2ba1

Go to PDB code: 
Top Page protein metals Protein-protein interface(s) pores links
Pore analysis for: 2ba1 calculated with MOLE 2.0 PDB id
2ba1
Pores calculated on whole structure Pores calculated excluding ligands

View options
MOLEonline 2.0 manipulation
and
visualization
with HETATM:
without HETATM:
 
27 pores, coloured by radius 27 pores, coloured by radius 27 pores, coloured as in
list below
Pores are connected internal spaces going through the structure. Only pores longer than 25 Å are shown.
Pores
Free R
Length
HPathy
HPhob
Polar
Rel Mut
Residue..type
Ligands
Radius
1 2.14 2.45 25.7 -1.71 -0.39 23.6 79 2 5 1 2 1 1 0  
2 2.95 3.11 25.7 -3.07 -0.42 32.7 80 6 4 1 0 2 0 0  
3 4.59 5.88 26.1 -1.32 0.10 26.1 83 4 4 2 4 2 0 0  
4 3.55 3.69 29.6 -3.01 -0.34 32.0 84 7 4 1 1 1 0 0  
5 2.37 2.39 34.0 -0.65 -0.08 19.4 80 3 6 1 3 1 1 0  
6 3.01 3.17 58.1 -2.52 -0.66 29.4 78 10 9 2 1 1 2 0  
7 3.00 3.16 72.1 -2.63 -0.42 28.7 78 13 7 2 1 2 5 0  
8 3.76 3.75 73.4 -2.59 -0.46 31.5 79 11 11 1 2 0 5 0  
9 3.81 3.81 73.4 -2.30 -0.39 29.4 78 13 10 2 4 0 7 0  
10 2.99 3.15 74.3 -2.35 -0.38 28.7 78 13 9 2 3 2 5 0  
11 2.43 2.76 79.9 -2.22 -0.57 25.7 81 10 12 3 3 2 2 0  
12 2.42 2.75 90.2 -2.36 -0.43 26.0 79 14 9 3 3 3 6 0  
13 2.69 4.66 93.4 -2.50 -0.46 32.6 79 13 14 1 4 2 4 0  
14 3.74 3.74 97.6 -2.04 -0.38 28.2 77 13 16 1 4 0 7 0  
15 3.03 3.18 98.2 -2.17 -0.35 26.0 77 18 10 2 2 4 6 0  
16 3.05 3.20 98.6 -1.90 -0.35 25.7 78 17 13 2 4 2 6 0  
17 3.01 3.20 99.5 -2.32 -0.42 29.9 77 16 15 1 3 2 6 0  
18 2.38 2.75 100.2 -2.03 -0.34 27.2 79 14 12 3 6 4 5 0  
19 2.97 3.11 101.8 -2.50 -0.47 30.2 77 15 15 1 1 2 6 0  
20 2.15 2.43 104.4 -2.25 -0.35 26.6 78 15 11 3 5 5 6 0  
21 2.04 2.46 116.6 -1.73 -0.54 24.2 82 4 11 6 5 2 3 0  
22 2.16 2.70 128.7 -1.82 -0.32 27.9 81 15 13 4 9 1 2 0  
23 2.64 2.67 144.0 -2.21 -0.34 31.3 82 18 14 4 11 2 1 0  
24 2.48 2.95 144.7 -2.28 -0.40 32.8 81 16 17 3 9 1 2 0  
25 2.18 2.65 146.1 -2.91 -0.37 37.1 81 17 12 4 7 1 5 0  
26 2.12 2.06 149.7 -2.02 -0.38 28.8 83 13 12 8 11 3 1 0  
27 2.42 2.73 170.1 -2.16 -0.39 29.5 81 18 16 5 11 3 3 0  

Residue-type_colouring
Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine
H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C

Acknowledgement
Pores were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.
spacer
spacer