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PDBsum entry 2b9v

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Top Page protein Protein-protein interface(s) pores links
Pore analysis for: 2b9v calculated with MOLE 2.0 PDB id
2b9v
Pores calculated on whole structure Pores calculated excluding ligands

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0 pores, coloured by radius 22 pores, coloured by radius 22 pores, coloured as in
list below
Pores are connected internal spaces going through the structure. Only pores longer than 25 Å are shown.
Pores
Free R
Length
HPathy
HPhob
Polar
Rel Mut
Residue..type
Ligands
Radius
1 3.08 3.28 56.5 -1.74 -0.46 24.5 82 5 4 3 2 1 1 0  
2 2.54 2.66 66.4 -1.84 -0.38 31.0 83 8 6 3 4 1 1 0  
3 2.06 2.54 78.4 -2.59 -0.63 28.8 83 9 8 8 2 1 2 0  
4 1.03 2.12 125.2 -2.33 -0.54 22.2 84 14 9 11 4 4 3 0  
5 1.89 5.06 130.3 -2.45 -0.59 23.6 83 15 8 15 2 3 6 0  
6 2.22 3.98 135.3 -2.09 -0.44 22.4 82 13 9 9 5 3 4 0  
7 1.82 3.06 133.5 -1.24 -0.36 18.1 85 8 8 8 9 2 2 0  
8 2.01 2.66 140.5 -2.36 -0.51 26.4 82 12 13 11 4 2 4 0  
9 1.27 1.42 146.5 -1.97 -0.50 20.7 83 16 9 12 7 4 7 0  
10 1.37 1.50 163.8 -2.45 -0.55 27.1 80 19 12 10 5 3 5 0  
11 1.43 1.44 170.8 -1.79 -0.57 18.1 81 12 8 10 3 2 6 2  
12 1.31 1.44 199.4 -1.79 -0.42 14.1 83 15 4 19 12 6 13 0  
13 1.36 1.50 228.3 -2.26 -0.47 25.0 80 27 17 11 8 4 8 0  
14 1.43 1.64 233.5 -2.45 -0.52 27.7 80 26 21 13 7 3 8 0  
15 1.40 1.50 262.1 -1.95 -0.61 19.4 85 18 18 24 9 4 10 0  
16 1.18 1.40 271.8 -1.31 -0.35 18.5 84 20 16 16 21 4 7 0  
17 1.38 1.52 298.2 -2.30 -0.55 20.8 82 26 15 25 10 6 13 0  
18 1.24 1.36 373.3 -1.59 -0.38 21.1 83 31 25 19 24 3 11 0  
19 1.19 1.40 375.9 -1.11 -0.32 18.3 86 22 23 20 28 2 7 0  
20 1.19 1.57 387.2 -1.78 -0.44 22.8 82 37 29 20 22 5 11 0  
21 1.32 1.31 392.0 -1.77 -0.46 22.0 82 32 30 26 20 4 8 2  
22 1.22 1.56 482.4 -1.59 -0.45 17.8 83 36 24 33 28 10 16 2  

Residue-type_colouring
Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine
H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C

Acknowledgement
Pores were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.
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