spacer
spacer

PDBsum entry 2b7c

Go to PDB code: 
Top Page protein Protein-protein interface(s) tunnels links
Tunnel analysis for: 2b7c calculated with MOLE 2.0 PDB id
2b7c
Tunnels calculated on whole structure Tunnels calculated excluding ligands

View options
MOLEonline 2.0 manipulation
and
visualization
with HETATM:
without HETATM:
 
4 tunnels, coloured by tunnel radius 4 tunnels, coloured by tunnel radius 4 tunnels, coloured as in
list below
Tunnels are interior spaces connected with the protein surrounding. Only channels longer than 15 Å are shown.
Tunnels
Free R
Length
HPathy
HPhob
Polar
Rel Mut
Residue..type
Ligands
Radius
1 1.08 2.10 30.1 0.89 0.23 4.6 89 1 1 2 11 1 1 0  
2 1.10 2.06 42.1 1.12 0.39 6.1 89 3 1 3 15 2 0 0  
3 1.19 2.20 51.5 0.12 0.06 10.1 90 4 3 4 15 2 0 0  
4 1.21 1.96 62.3 0.18 0.01 9.0 92 4 4 3 15 2 0 0  

Residue-type_colouring
Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine
H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C

Acknowledgement
Tunnels were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.
spacer
spacer