PDBsum entry 2b5u Go to PDB code:  Pore analysis for: 2b5u calculated with MOLE 2.0 PDB id 2b5u Pores calculated on whole structure Pores calculated excluding ligands View options MOLEonline 2.0 manipulation and visualization with HETATM: without HETATM:   7 pores, coloured by radius 9 pores, coloured by radius 9 pores, coloured as in list below Pores are connected internal spaces going through the structure. Only pores longer than 25 Å are shown. Pores Free R Length HPathy HPhob Polar Rel Mut Residue..type Ligands Radius 1 1.28 1.55 29.6 -0.93 0.02 13.1 65 2 4 0 1 4 1 0   2 2.24 2.34 30.9 -1.33 -0.36 18.5 82 3 3 3 3 2 0 0   3 2.06 3.32 108.8 -2.07 -0.50 22.9 78 5 5 4 2 3 2 0   4 1.27 1.56 28.2 -1.23 -0.39 16.1 74 2 3 2 1 2 1 0   5 2.94 3.85 28.4 -2.99 -0.47 31.9 79 5 5 4 1 1 1 0   6 1.29 1.58 32.3 -0.99 -0.03 15.8 66 2 5 0 1 4 1 0   7 1.65 1.82 45.0 -2.10 -0.40 25.1 80 6 5 1 2 1 2 0   8 1.29 1.48 89.1 -1.76 -0.44 17.4 82 6 4 7 3 1 4 0   9 1.71 1.84 60.1 -2.81 -0.49 31.9 84 7 4 4 2 0 0 0   Residue-type_colouring Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C Acknowledgement Pores were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.