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PDBsum entry 2b5g

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Top Page protein ligands Protein-protein interface(s) pores links
Pore analysis for: 2b5g calculated with MOLE 2.0 PDB id
2b5g
Pores calculated on whole structure Pores calculated excluding ligands

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5 pores, coloured by radius 6 pores, coloured by radius 6 pores, coloured as in
list below
Pores are connected internal spaces going through the structure. Only pores longer than 25 Å are shown.
Pores
Free R
Length
HPathy
HPhob
Polar
Rel Mut
Residue..type
Ligands
Radius
1 1.77 1.87 32.6 -1.04 0.26 11.4 66 2 2 3 2 6 0 0  SO4 172 A SO4 174 A
2 1.88 5.42 39.6 -1.14 -0.05 18.4 68 3 6 3 4 8 1 0  SO4 172 B SO4 173 B
3 1.88 4.38 43.1 -1.21 0.32 23.1 68 5 7 2 8 7 0 0  
4 1.64 2.46 44.4 -0.11 0.21 13.2 69 3 4 4 5 9 1 0  SO4 172 B SO4 173 B
5 1.74 3.27 57.4 -1.37 0.09 20.6 68 5 7 3 6 12 1 0  SO4 172 B SO4 173 B
6 1.17 1.15 88.1 -0.29 0.16 16.6 74 6 5 4 8 4 0 0  MSE 118 A

Residue-type_colouring
Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine
H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C

Acknowledgement
Pores were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.
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