PDBsum entry 2b5d Go to PDB code:  Pore analysis for: 2b5d calculated with MOLE 2.0 PDB id 2b5d Pores calculated on whole structure Pores calculated excluding ligands View options MOLEonline 2.0 manipulation and visualization with HETATM: without HETATM:   4 pores, coloured by radius 4 pores, coloured by radius 4 pores, coloured as in list below Pores are connected internal spaces going through the structure. Only pores longer than 25 Å are shown. Pores Free R Length HPathy HPhob Polar Rel Mut Residue..type Ligands Radius 1 1.37 1.72 40.9 -1.10 -0.03 23.4 72 4 4 1 4 6 1 0   2 1.25 1.40 43.4 -1.13 -0.10 24.2 75 7 4 0 3 4 1 0   3 1.46 1.65 57.9 -0.42 -0.17 10.8 69 2 2 1 3 4 2 0   4 1.17 1.17 72.6 0.34 0.24 6.2 77 2 2 3 9 6 1 0   Residue-type_colouring Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C Acknowledgement Pores were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.