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PDBsum entry 2b4t

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Top Page protein ligands Protein-protein interface(s) pores links
Pore analysis for: 2b4t calculated with MOLE 2.0 PDB id
2b4t
Pores calculated on whole structure Pores calculated excluding ligands

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4 pores, coloured by radius 5 pores, coloured by radius 5 pores, coloured as in
list below
Pores are connected internal spaces going through the structure. Only pores longer than 25 Å are shown.
Pores
Free R
Length
HPathy
HPhob
Polar
Rel Mut
Residue..type
Ligands
Radius
1 1.20 1.64 37.7 -0.24 -0.41 8.4 91 2 1 3 5 0 0 1  AES 603 R NAD 901 R
2 1.21 1.25 42.3 -0.68 -0.38 10.1 86 4 2 4 7 0 1 1  AES 603 R NAD 901 R
3 2.04 2.40 49.5 -0.73 -0.68 3.8 89 2 0 8 7 0 2 0  
4 1.26 1.70 57.0 -0.54 -0.44 9.1 87 6 1 5 8 0 1 1  NAD 801 Q
5 1.25 1.32 76.6 -0.62 -0.20 15.4 81 5 2 4 7 2 1 1  AES 602 P NAD 701 P

Residue-type_colouring
Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine
H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C

Acknowledgement
Pores were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.
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