PDBsum entry 2b4d Go to PDB code:  Pore analysis for: 2b4d calculated with MOLE 2.0 PDB id 2b4d Pores calculated on whole structure Pores calculated excluding ligands View options MOLEonline 2.0 manipulation and visualization with HETATM: without HETATM:   2 pores, coloured by radius 4 pores, coloured by radius 4 pores, coloured as in list below Pores are connected internal spaces going through the structure. Only pores longer than 25 Å are shown. Pores Free R Length HPathy HPhob Polar Rel Mut Residue..type Ligands Radius 1 1.69 4.03 38.1 -1.03 0.40 18.7 68 4 6 2 8 7 0 0   2 1.67 4.02 38.6 -0.81 0.48 16.1 67 3 7 1 6 7 0 0  MSE 30 A 3 1.68 4.03 41.7 -0.65 -0.04 15.2 72 3 5 4 5 7 0 0  COA 200 B 4 1.69 3.11 62.4 -1.18 0.12 16.3 69 5 7 4 7 13 0 0  COA 200 B Residue-type_colouring Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C Acknowledgement Pores were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.