 |
PDBsum entry 2axt
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
 |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Tunnel analysis for: 2axt calculated with  MOLE 2.0
|
PDB id
|
|
|
|
2axt
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Tunnels calculated on whole structure |
|
Tunnels calculated excluding ligands
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
 |
|
|
|
|
|
3 tunnels,
coloured by tunnel radius |
|
3 tunnels,
coloured by
tunnel radius
|
3 tunnels,
coloured as in
list below
|
|
|
|
|
|
Tunnels are interior spaces connected with the protein surrounding. Only channels longer than 15 Å are shown. |
|
|
|
|
|
|
|
Free R
|
|
|
|
|
|
|
Length
|
|
|
|
|
|
|
HPathy
|
|
|
|
|
|
|
HPhob
|
|
|
|
|
|
|
Polar
|
|
|
|
|
|
|
Rel Mut
|
|
|
|
|
|
|
Residue..type
|
|
|
|
|
|
|
Ligands
|
|
|
|
|
|
|
 |
Radius |
 |
1 |
 |
1.16 |
1.13 |
79.8 |
-0.28 |
-0.23 |
9.5 |
83 |
|
7 |
6 |
11 |
22 |
6 |
5 |
0 |
|
UNL 5479 c DGD 5508 c UNK 5001 x
|
 |
|
2 |
 |
1.15 |
1.13 |
93.1 |
0.32 |
0.04 |
3.7 |
76 |
5 |
4 |
11 |
23 |
13 |
13 |
1 |
CLA 5495 c CLA 5496 c CLA 5497 c BCR 5506 c DGD
5507 c MGE 5201 i
|
 |
3 |
 |
1.11 |
1.19 |
96.3 |
-0.56 |
-0.32 |
8.5 |
84 |
7 |
10 |
14 |
19 |
8 |
11 |
0 |
DGD 5507 c MGE 5201 i
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
 |
|
|
 |
Residue-type_colouring |
 |
|
|
|
Positive
|
Negative
|
Neutral
|
Aliphatic
|
Aromatic
|
Pro & Gly
|
Cysteine
|
|
H,K,R
|
D,E
|
S,T,N,Q
|
A,V,L,I,M
|
F,Y,W
|
P,G
|
C
|
|
|
|
MOLE 2.0 program