 |
PDBsum entry 2ax0
|
|
|
|
 |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
 |
|
|
|
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
|
|
|
|
|
|
|
|
|
|
Pore analysis for: 2ax0 calculated with MOLE 2.0
|
PDB id
|
|
|
|
2ax0
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
 |
Pores calculated on whole structure |
 |
Pores calculated excluding ligands
|
|
|
 |
 |
 |
 |
 |
|
 |
|
|
|
 |
 |
|
 |
|
|
|
 |
3 pores,
coloured by radius |
 |
8 pores,
coloured by radius
|
8 pores,
coloured as in list below
|
|
|
 |
 |
 |
Pores are connected internal spaces going through the structure. Only pores longer than 25 Å are shown. |
|
|
 |
|
|
|
 |
Free R
|
 |
|
|
|
|
 |
Length
|
 |
|
|
|
|
 |
HPathy
|
 |
|
|
|
|
 |
HPhob
|
 |
|
|
|
|
 |
Polar
|
 |
|
|
|
|
 |
Rel Mut
|
 |
|
|
|
|
 |
Residue..type
|
 |
|
|
|
|
 |
Ligands
|
 |
|
|
|
|
|
 |
Radius |
 |
1 |
 |
2.15 |
2.39 |
35.4 |
-2.09 |
-0.48 |
21.7 |
72 |
 |
3 |
2 |
1 |
0 |
2 |
5 |
0 |
 |
|
 |
 |
2 |
 |
2.15 |
2.44 |
38.4 |
-2.14 |
-0.46 |
24.8 |
72 |
4 |
3 |
1 |
0 |
3 |
3 |
0 |
|
 |
3 |
 |
1.46 |
1.71 |
38.7 |
-0.54 |
-0.11 |
12.6 |
82 |
5 |
3 |
4 |
4 |
3 |
1 |
1 |
5X 1001 A SO4 1101 A
|
 |
4 |
 |
3.16 |
4.99 |
39.4 |
-2.15 |
-0.62 |
26.5 |
87 |
5 |
5 |
5 |
2 |
0 |
0 |
1 |
5X 1001 A SO4 1101 A
|
 |
5 |
 |
1.52 |
1.76 |
40.9 |
-0.95 |
-0.18 |
16.6 |
79 |
6 |
5 |
4 |
4 |
4 |
1 |
1 |
5X 1002 B SO4 1104 B
|
 |
6 |
 |
1.46 |
1.70 |
45.6 |
-0.63 |
-0.14 |
12.8 |
83 |
6 |
2 |
6 |
6 |
3 |
1 |
1 |
5X 1001 A
|
 |
7 |
 |
1.50 |
1.74 |
70.0 |
-1.35 |
-0.18 |
21.1 |
78 |
12 |
4 |
4 |
5 |
3 |
3 |
1 |
5X 1001 A SO4 1101 A
|
 |
8 |
 |
1.99 |
3.24 |
73.0 |
-1.56 |
-0.20 |
26.1 |
82 |
12 |
3 |
6 |
5 |
0 |
1 |
1 |
5X 1001 A SO4 1101 A
|
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
Residue-type_colouring |
 |
|
 |
|
Positive
|
Negative
|
Neutral
|
Aliphatic
|
Aromatic
|
Pro & Gly
|
Cysteine
|
|
H,K,R
|
D,E
|
S,T,N,Q
|
A,V,L,I,M
|
F,Y,W
|
P,G
|
C
|
|
|
 |