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PDBsum entry 2avv

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Top Page protein ligands metals Protein-protein interface(s) pores links
Pore analysis for: 2avv calculated with MOLE 2.0 PDB id
2avv
Pores calculated on whole structure Pores calculated excluding ligands

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2 pores, coloured by radius 3 pores, coloured by radius 3 pores, coloured as in
list below
Pores are connected internal spaces going through the structure. Only pores longer than 25 Å are shown.
Pores
Free R
Length
HPathy
HPhob
Polar
Rel Mut
Residue..type
Ligands
Radius
1 3.19 3.35 30.1 -1.17 -0.63 11.7 83 2 1 1 1 0 2 0  
2 2.17 2.90 52.6 -0.88 -0.36 19.2 82 6 7 1 7 1 2 0  MK1 902 E
3 2.00 1.96 65.6 -2.48 -0.57 30.3 82 8 6 3 3 0 2 0  

Residue-type_colouring
Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine
H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C

Acknowledgement
Pores were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.
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