spacer
spacer

PDBsum entry 2avs

Go to PDB code: 
Top Page protein ligands Protein-protein interface(s) tunnels links
Tunnel analysis for: 2avs calculated with MOLE 2.0 PDB id
2avs
Tunnels calculated on whole structure Tunnels calculated excluding ligands

View options
MOLEonline 2.0 manipulation
and
visualization
with HETATM:
without HETATM:
 
0 tunnels, coloured by tunnel radius 3 tunnels, coloured by tunnel radius 3 tunnels, coloured as in
list below
Tunnels are interior spaces connected with the protein surrounding. Only channels longer than 15 Å are shown.
Tunnels
Free R
Length
HPathy
HPhob
Polar
Rel Mut
Residue..type
Ligands
Radius
1 1.54 2.85 15.2 1.22 0.20 10.1 97 0 2 0 5 0 0 0  MK1 902 B
2 1.53 2.87 25.6 1.00 0.05 7.8 87 1 2 0 8 1 1 0  MK1 902 B
3 1.55 3.44 25.8 1.35 0.12 6.9 96 1 3 0 10 0 0 0  MK1 902 B

Residue-type_colouring
Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine
H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C

Acknowledgement
Tunnels were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.
spacer
spacer