PDBsum entry 2af7 Go to PDB code:  Pore analysis for: 2af7 calculated with MOLE 2.0 PDB id 2af7 Pores calculated on whole structure Pores calculated excluding ligands View options MOLEonline 2.0 manipulation and visualization with HETATM: without HETATM:   2 pores, coloured by radius 7 pores, coloured by radius 7 pores, coloured as in list below Pores are connected internal spaces going through the structure. Only pores longer than 25 Å are shown. Pores Free R Length HPathy HPhob Polar Rel Mut Residue..type Ligands Radius 1 1.82 1.82 25.6 -1.89 -0.62 28.9 84 3 4 1 2 0 1 0   2 1.21 1.21 33.4 -0.76 0.02 11.3 86 4 2 5 5 2 0 0  MSE 14 H 3 1.60 1.71 50.2 -0.89 -0.28 14.6 87 4 4 5 6 1 1 0  MSE 14 G 4 1.29 1.60 51.5 -1.03 -0.33 16.6 87 5 5 6 6 2 0 0  MSE 14 H 5 1.20 1.32 52.4 -0.51 0.00 15.2 85 4 4 5 6 3 0 0  MSE 14 A 6 1.56 1.74 54.3 -0.06 0.03 11.9 81 3 3 3 8 3 1 0  MSE 8 G MSE 14 G 7 1.32 2.04 177.1 -1.34 -0.46 21.8 83 13 16 10 14 1 0 0  MSE 14 D Residue-type_colouring Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C Acknowledgement Pores were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.