PDBsum entry 2af7 Go to PDB code:  Tunnel analysis for: 2af7 calculated with MOLE 2.0 PDB id 2af7 Tunnels calculated on whole structure Tunnels calculated excluding ligands View options MOLEonline 2.0 manipulation and visualization with HETATM: without HETATM:   5 tunnels, coloured by tunnel radius 5 tunnels, coloured by tunnel radius 5 tunnels, coloured as in list below Tunnels are interior spaces connected with the protein surrounding. Only channels longer than 15 Å are shown. Tunnels Free R Length HPathy HPhob Polar Rel Mut Residue..type Ligands Radius 1 1.87 1.96 16.1 0.25 0.17 7.7 80 1 0 4 7 2 0 0   2 1.84 1.92 18.0 0.05 0.16 9.6 80 1 0 4 6 4 0 0   3 1.81 1.88 18.5 -0.47 -0.03 11.3 86 2 1 4 3 2 0 0   4 1.34 1.97 19.8 -1.18 -0.46 4.7 77 0 1 2 2 2 0 0  MSE 14 B 5 1.82 1.82 22.0 -0.28 -0.10 9.1 86 2 1 4 3 2 0 0   Residue-type_colouring Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C Acknowledgement Tunnels were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.