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PDBsum entry 2af6
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Tunnel analysis for: 2af6 calculated with  MOLE 2.0
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PDB id
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2af6
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Tunnels calculated on whole structure |
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Tunnels calculated excluding ligands
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0 tunnels,
coloured by tunnel radius |
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7 tunnels,
coloured by
tunnel radius
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7 tunnels,
coloured as in
list below
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Tunnels are interior spaces connected with the protein surrounding. Only channels longer than 15 Å are shown. |
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Free R
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Length
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HPathy
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HPhob
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Polar
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Rel Mut
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Residue..type
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Ligands
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Radius |
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1 |
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1.49 |
1.67 |
35.1 |
-1.57 |
-0.59 |
13.3 |
97 |
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5 |
1 |
6 |
2 |
1 |
0 |
0 |
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FAD 2600 C FAD 1600 D
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2 |
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1.48 |
1.67 |
36.7 |
-1.74 |
-0.57 |
16.1 |
96 |
6 |
1 |
6 |
1 |
1 |
0 |
0 |
FAD 2600 C FAD 1600 D
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3 |
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1.48 |
1.60 |
37.7 |
-1.87 |
-0.51 |
18.8 |
96 |
6 |
1 |
6 |
1 |
1 |
0 |
0 |
FAD 2600 C FAD 1600 D
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4 |
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1.49 |
1.67 |
47.7 |
-1.47 |
-0.50 |
15.2 |
97 |
9 |
1 |
7 |
3 |
1 |
0 |
0 |
FAD 4600 A FAD 3600 B FAD 2600 C
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5 |
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1.49 |
1.62 |
49.8 |
-1.41 |
-0.52 |
13.4 |
98 |
7 |
1 |
7 |
3 |
1 |
0 |
0 |
FAD 4600 A FAD 3600 B FAD 1600 D
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6 |
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1.50 |
1.62 |
54.7 |
-1.90 |
-0.43 |
21.5 |
95 |
11 |
1 |
8 |
3 |
1 |
0 |
0 |
FAD 1600 D BRU 1603 D
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7 |
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1.23 |
1.23 |
17.7 |
0.00 |
-0.16 |
13.8 |
80 |
2 |
2 |
0 |
3 |
0 |
1 |
0 |
MSE 122 B
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Residue-type_colouring |
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Positive
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Negative
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Neutral
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Aliphatic
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Aromatic
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Pro & Gly
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Cysteine
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H,K,R
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D,E
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S,T,N,Q
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A,V,L,I,M
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F,Y,W
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P,G
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C
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MOLE 2.0 program