spacer
spacer

PDBsum entry 2ac4

Go to PDB code: 
Top Page protein tunnels links
Tunnel analysis for: 2ac4 calculated with MOLE 2.0 PDB id
2ac4
Tunnels calculated on whole structure Tunnels calculated excluding ligands

View options
MOLEonline 2.0 manipulation
and
visualization
with HETATM:
without HETATM:
 
5 tunnels, coloured by tunnel radius 5 tunnels, coloured by tunnel radius 5 tunnels, coloured as in
list below
Tunnels are interior spaces connected with the protein surrounding. Only channels longer than 15 Å are shown.
Tunnels
Free R
Length
HPathy
HPhob
Polar
Rel Mut
Residue..type
Ligands
Radius
1 1.39 2.13 26.2 -0.99 0.05 20.3 75 2 2 1 4 3 0 1  
2 1.48 1.58 28.0 -0.40 -0.06 13.2 80 1 2 1 4 3 0 0  
3 1.39 2.23 28.7 -0.77 0.10 16.3 80 2 1 2 3 3 0 1  
4 1.58 1.61 31.6 -0.16 0.48 14.7 73 4 1 1 5 5 0 1  
5 1.56 1.60 38.8 -0.14 0.39 11.8 75 3 2 1 5 5 1 1  

Residue-type_colouring
Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine
H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C

Acknowledgement
Tunnels were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.
spacer
spacer