PDBsum entry 2aa5 Go to PDB code:  Tunnel analysis for: 2aa5 calculated with MOLE 2.0 PDB id 2aa5 Tunnels calculated on whole structure Tunnels calculated excluding ligands View options MOLEonline 2.0 manipulation and visualization with HETATM: without HETATM:   8 tunnels, coloured by tunnel radius 9 tunnels, coloured by tunnel radius 9 tunnels, coloured as in list below Tunnels are interior spaces connected with the protein surrounding. Only channels longer than 15 Å are shown. Tunnels Free R Length HPathy HPhob Polar Rel Mut Residue..type Ligands Radius 1 1.23 1.49 34.9 -0.17 0.06 10.6 77 1 1 3 10 4 1 1  STR 302 B 2 1.16 1.43 34.4 -0.38 0.04 11.6 75 2 1 3 7 5 1 1  STR 301 A 3 1.31 1.41 26.6 0.69 0.11 9.0 82 2 0 3 9 1 1 0   4 1.30 1.73 28.4 0.52 0.16 10.2 82 2 0 3 9 1 1 0   5 1.43 1.67 15.3 -0.33 -0.05 9.3 70 1 2 1 3 2 0 0   6 1.23 1.92 17.0 -0.43 -0.01 11.9 72 2 2 1 3 2 0 0   7 1.24 1.89 17.2 -0.51 -0.02 12.3 73 2 2 1 2 2 0 0   8 1.24 1.91 18.0 -0.39 0.06 10.1 74 1 1 2 3 2 0 0   9 1.24 1.89 18.2 -0.51 0.05 9.9 76 1 1 2 2 2 0 0   Residue-type_colouring Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C Acknowledgement Tunnels were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.