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PDBsum entry 2a8t
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Tunnel analysis for: 2a8t calculated with  MOLE 2.0
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PDB id
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2a8t
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Tunnels calculated on whole structure |
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Tunnels calculated excluding ligands
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3 tunnels,
coloured by tunnel radius |
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7 tunnels,
coloured by
tunnel radius
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7 tunnels,
coloured as in
list below
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Tunnels are interior spaces connected with the protein surrounding. Only channels longer than 15 Å are shown. |
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Free R
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Length
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HPathy
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HPhob
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Polar
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Rel Mut
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Residue..type
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Ligands
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Radius |
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1 |
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1.89 |
1.92 |
16.9 |
-0.51 |
-0.02 |
12.2 |
84 |
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3 |
0 |
3 |
1 |
1 |
1 |
1 |
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ADN 252 A
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2 |
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1.93 |
1.95 |
21.1 |
-0.15 |
0.16 |
12.8 |
85 |
2 |
1 |
4 |
2 |
2 |
0 |
1 |
MGT 251 A ADN 252 A
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3 |
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1.90 |
1.92 |
21.5 |
-0.54 |
0.15 |
18.3 |
79 |
2 |
1 |
3 |
2 |
4 |
0 |
1 |
MGT 251 A ADN 252 A MN 303 A
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4 |
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2.00 |
2.03 |
15.4 |
-0.65 |
0.10 |
17.9 |
82 |
2 |
1 |
3 |
1 |
2 |
0 |
1 |
MGT 251 B ADN 252 B MN 304 B
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5 |
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1.79 |
3.10 |
15.9 |
0.07 |
0.19 |
10.7 |
80 |
3 |
0 |
2 |
1 |
1 |
1 |
1 |
ADN 252 B
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6 |
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1.96 |
1.96 |
17.8 |
-0.24 |
0.12 |
12.1 |
81 |
3 |
0 |
3 |
1 |
2 |
1 |
1 |
ADN 252 B
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7 |
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1.22 |
1.22 |
17.5 |
-0.63 |
-0.29 |
18.6 |
75 |
1 |
3 |
0 |
3 |
1 |
0 |
0 |
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Residue-type_colouring |
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Positive
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Negative
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Neutral
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Aliphatic
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Aromatic
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Pro & Gly
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Cysteine
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H,K,R
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D,E
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S,T,N,Q
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A,V,L,I,M
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F,Y,W
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P,G
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C
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MOLE 2.0 program