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PDBsum entry 2a8s
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Tunnel analysis for: 2a8s calculated with  MOLE 2.0
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PDB id
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2a8s
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Tunnels calculated on whole structure |
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Tunnels calculated excluding ligands
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2 tunnels,
coloured by tunnel radius |
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6 tunnels,
coloured by
tunnel radius
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6 tunnels,
coloured as in
list below
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Tunnels are interior spaces connected with the protein surrounding. Only channels longer than 15 Å are shown. |
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Free R
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Length
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HPathy
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HPhob
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Polar
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Rel Mut
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Residue..type
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Ligands
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Radius |
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1 |
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2.11 |
3.06 |
15.3 |
-0.67 |
0.07 |
18.7 |
83 |
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2 |
3 |
2 |
2 |
2 |
0 |
0 |
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GTP 251 B MN 304 B MN 305 B
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2 |
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2.12 |
3.07 |
16.1 |
-0.63 |
0.04 |
15.4 |
85 |
3 |
1 |
2 |
1 |
1 |
1 |
0 |
YCM 120 B GTP 251 B
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3 |
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1.30 |
1.30 |
22.3 |
-0.37 |
0.11 |
16.6 |
79 |
2 |
1 |
1 |
2 |
3 |
0 |
0 |
GTP 250 A MN 303 A
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4 |
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1.30 |
1.29 |
23.6 |
-0.37 |
-0.07 |
10.4 |
83 |
2 |
1 |
2 |
1 |
1 |
1 |
0 |
GTP 250 A
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5 |
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1.29 |
1.29 |
24.2 |
-1.44 |
-0.39 |
14.6 |
83 |
4 |
0 |
2 |
1 |
1 |
1 |
0 |
GTP 250 A
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6 |
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1.23 |
1.44 |
15.4 |
0.17 |
0.13 |
11.4 |
90 |
1 |
1 |
1 |
4 |
1 |
0 |
0 |
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Residue-type_colouring |
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Positive
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Negative
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Neutral
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Aliphatic
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Aromatic
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Pro & Gly
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Cysteine
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H,K,R
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D,E
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S,T,N,Q
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A,V,L,I,M
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F,Y,W
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P,G
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C
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MOLE 2.0 program