PDBsum entry 2a8p Go to PDB code:  Tunnel analysis for: 2a8p calculated with MOLE 2.0 PDB id 2a8p Tunnels calculated on whole structure Tunnels calculated excluding ligands View options MOLEonline 2.0 manipulation and visualization with HETATM: without HETATM:   4 tunnels, coloured by tunnel radius 4 tunnels, coloured by tunnel radius 4 tunnels, coloured as in list below Tunnels are interior spaces connected with the protein surrounding. Only channels longer than 15 Å are shown. Tunnels Free R Length HPathy HPhob Polar Rel Mut Residue..type Ligands Radius 1 1.45 1.56 15.3 -1.73 -0.35 14.8 92 2 0 3 1 1 0 0   2 1.45 1.56 17.4 -0.36 0.08 11.6 81 3 0 3 1 2 1 1   3 1.17 1.34 25.4 0.85 0.29 8.7 75 2 1 1 10 1 0 0   4 1.30 1.53 15.0 -0.11 -0.05 13.6 89 1 1 1 4 0 0 0   Residue-type_colouring Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C Acknowledgement Tunnels were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.